Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4279 ATGGAATCCCAATCCAAATCCCAATCTCAACCAATTCTCCCTCCTATGGACCCTCCCGAAGATCTCTCCTCCGTTTGGGACCTCTCTTATCTCCTTGATTTCAATCTCGACGATGAAATTCCACAACTCCCTCCTCCTCTTCCAAACCCTAACCCTAACACCGAGGAAAATGACAGGATCCGGAAGCGTGACCCGAGATTAACTTGCTCCAACTTTCTCGCGGGTCAAGTACCATGTGCATGCCCCGAACTCGATGCTTTGCTTGAAGATAACGGTTTACCGGGAAAGAAACGCGCTCGAACTTCACGCGCTTCTGCGTCGGCGCGTTGTCAGGTTCCTGGTTGTGAAGTTGATATTTCTGAGCTTAAAGGCTATCATCGACGGCATAGGGTTTGTTTGCGTTGTGCTAATGCTGCTACTGTTGTTCTTGATGGTGAGGTGAAGAGATACTGTCAACAGTGTGGGAAGTTTCATGTTTTACCGGATTTTGATGAAGGGAAACGGAGTTGTAGAAGGAAATTGGAGCGGCATAATACTAGGAGGAGGAGAAAAGCCTTAGATTTTGTAGCAGGAGTTGATCATGAAGTTCAAACTGTTACTCAAAATGATGATTCCAATTGTGATGGAGAATTAGGAATAGATTATTCAAATTTGAGTAATGAGAATATTGAAAAAAGAGTGTCGCCGGATCATGAAGAAGCACCGGTTGCTAATGGGTCCTCAACTCCAGAGACCCAGAATGTTAATGGTGATAGTGTTGTGTCCTTTGTTGCTTCTGCAGAAACACAAGTGAATACTGCAAAAGATGTTTCCGATCTTTCTAAGTCGCCTTCATATTGTGACAATAAGAGTGATTATTCCTCTATGTGCCAAACAGGTCGGGTTTCTTTTAAGCTTTATGATTGGAATCCTGCGGAATTTCCTAGAAGGCTGCGGCTCCAAATATTCCAATGGTTGGCAAGTATGCCTGTGGAGCTGGAGGGATATATCCGCCCTGGGTGTACAATCCTGACAATATTTATTGCAATGCCAAATGTTATGTGGATAAATTTACTTAAAGACCCTATGTATTATGTTCGTGATCTTGTTGCTCCCAGAAAGATGCTATCTGGAAGAGGAACTGCACTAATTCATCTGAATGACATGATCTTCCGTGTAATGAAAGATGGAATTTCTGTGACAAAAGTCGAGGTAAACATGCAGGCACCTAGGCTTCACTATATTCATCCCACATGCTTTGAAGCAGGAAAACCCATGGAGTTTTTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAGTTTCGGCTTCTTGTATCTTTTCATGGAAAGTATCTGAAGTGTGAGTATTGCGTTCCGTCTCCACATAACTCGGCTGAAGACAATATTTCTTGTGCTTTTGATAATCAGTTATATAAGATATGTGTCCCTCATATTGACGAAAATCTCCTGGGGCCTGCATTTATTGAGGTTGAGAATGAGTCTGGTTTATCAAACTTTATTCCTGTACTTATTGGGGATAAAGAAATATGCACTGAAATGAAGATGTTGCAACAAAAACTAGATGCATCTCTCCTTTCTAAACAATTTCGGTCTGCATCTGGTGGTTCTATTTGTAGCTCATGTGAAGCTTTTGTACATATTCACAGATCATCATCAGACTTGCTTGTAGATATAGCATGGTTACTTAAAGACCCTACTTCAGAAATTTTTGACAGAATAGTATCTGCTTCACAGATTCAAAGATATTGCTGTTTGTTGGATTTTCTAATATGCAATGATTCAACTATCATTTTGGGAAAAATATTACCAAATTTGATAAGTATAACAAAAAACATGAAAACCAATATAAGTGATGTTGACATGGTCCAACTACTGGAGGGAATGTGTAATGCTAGAGATGCTATTTGTCGGAAACGTAGAGGTATGGTTTTGCACTCCAAAATGGAAGGCTTCAAACCTGCTCAGTGCAGTTCCCAAGATGCCAAGTTATCAGTTGTTGAAGTTAATAGTCAGGGTATCCAGTTTAGAGCAGATGCAGAGTTGGGAGTTCTGAGCAGTCTCGCTTCTGATGAAAAAAATCAGAAGATACCGCTTTTGAAAAGGGATATTATAATGAATATGGAAGAGTTTCCTAAAAGATGTGGTGACCATCGAAATCTTACCGGGGGATTCTTGAGATCTCGACCAACTATTTTTGTGCTTGTCTCACTTGTTGTTTGTCTTGCGGTATGTGTATCCATCTTTCATCATGGGAGGGTTAACGACTTGGCAGTATCCATTAGAAGGTGTTTGTTCAACCATTGA 2301 0.409 MESQSKSQSQPILPPMDPPEDLSSVWDLSYLLDFNLDDEIPQLPPPLPNPNPNTEENDRIRKRDPRLTCSNFLAGQVPCACPELDALLEDNGLPGKKRARTSRASASARCQVPGCEVDISELKGYHRRHRVCLRCANAATVVLDGEVKRYCQQCGKFHVLPDFDEGKRSCRRKLERHNTRRRRKALDFVAGVDHEVQTVTQNDDSNCDGELGIDYSNLSNENIEKRVSPDHEEAPVANGSSTPETQNVNGDSVVSFVASAETQVNTAKDVSDLSKSPSYCDNKSDYSSMCQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNVMWINLLKDPMYYVRDLVAPRKMLSGRGTALIHLNDMIFRVMKDGISVTKVEVNMQAPRLHYIHPTCFEAGKPMEFFACGSNLLQPKFRLLVSFHGKYLKCEYCVPSPHNSAEDNISCAFDNQLYKICVPHIDENLLGPAFIEVENESGLSNFIPVLIGDKEICTEMKMLQQKLDASLLSKQFRSASGGSICSSCEAFVHIHRSSSDLLVDIAWLLKDPTSEIFDRIVSASQIQRYCCLLDFLICNDSTIILGKILPNLISITKNMKTNISDVDMVQLLEGMCNARDAICRKRRGMVLHSKMEGFKPAQCSSQDAKLSVVEVNSQGIQFRADAELGVLSSLASDEKNQKIPLLKRDIIMNMEEFPKRCGDHRNLTGGFLRSRPTIFVLVSLVVCLAVCVSIFHHGRVNDLAVSIRRCLFNH* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4279 766 MobiDBLite consensus disorder prediction 39 62 - -
Mal4g4279 766 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 21 764 - -
Mal4g4279 766 Gene3D - 105 171 IPR036893 GO:0003677|GO:0005634
Mal4g4279 766 MobiDBLite consensus disorder prediction 1 21 - -
Mal4g4279 766 ProSiteProfiles Zinc finger SBP-type profile. 107 184 IPR004333 GO:0003677
Mal4g4279 766 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 21 764 IPR044817 GO:0003677
Mal4g4279 766 MobiDBLite consensus disorder prediction 228 249 - -
Mal4g4279 766 SUPERFAMILY SBT domain 108 188 IPR036893 GO:0003677|GO:0005634
Mal4g4279 766 Pfam SBP domain 110 184 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4279 Mal-Chr4 120057917 120064429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4279 11 760 SBP-box Gene Family AT5G18830 46.203 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal4g4279 SBP 2.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4279 - - lja:Lj6g3v1916050.1 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4279 4 120057917 120064429 Mal4g4279 4 120057917 120064429 ECH