Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4268 ATGAGCGATGAACAACGAGAACCACCACCGCCACAACCTTCTTCCTCTAGCAATGACGTTCACAAGCCAGAAAGAAAACTATTCGATAAAAAAGAGAGTACTAAAATAAGAGGCAGACGACCACGACCTGGATTTTCTGATTCTTTTTCTAATATTGACTTGTCAGTTTTAGAGATTGAGCTGGAGGGAAGCCAATCTGAGTATTCACCTAGAAGTCAAGAATCTGATACACCAAGTTCAAGGGCAAGCACTTCTGATTCTGAGGGAGGTTTAAGAGGTGGTCTTAATAATAATCAGTGGCGTGGTTTCTTTAAATTAATCAAAAAGGGATCACAAATGCCATTTCAAACTTTTCATCCACTGAAAAATGTTCCAAAACTTACTAGAAGAAAAAGCAAAAGAATTAGGGAGGATCTCATTCCATCTCTCAATTCACCAGCTCTTCAGTCTTCTTTTGACTCTGAGTTTATCTGCTTCAAATCTTTATGGAAAAATTTCACCCTCTTAGAGATTCAAGCTGCTACCAATGACTTTAGCCCTGATAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTAGGAAAATTGGAAGATGGAAACTTTGTTGCCATTAAAAGGTTGACAAGAGGTTGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCATGTGGATCACCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGTGGAATGTTTCTTGTTCTTCAATTGTCTCCTCATGGAAGCTTGTCCTCCTTACTCTATGGGCCTAGAGAGAAACTGAATTGGAGCCTTAGATTTAAGATTACTTTAGGGACTGCTGAGGGTCTTCGCTATCTGCATGAAGGATGTCAAAGAAGGATTATTCACAAAGATATTAAAGCTTCTAATATACTTCTCTCAGAGGACTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGATCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTTGGATATCTTCCTCCTGAGTTCTTCATGCATGGTATAGTAGATGAAAAAACTGATGTATATGCTTATGGTGTATTACTATTGGAGCTCATTACTGGGAGACAAGCTTTGGATAGTTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTATCTAGTAATAAAATCAAAGAGCTAGTTGATCCAATTTTGGGTGATGCTTATGATGAAGAACAAATGAAACTTGTCTTACAGATACTAAGAGGTGAAGAAGAGAGTTTGAGAATGTTGAAAGAGAGGCAGAAGTCAAAACTTCATAGGACATACTCTGAAGAACTATTTGATGCAGAAGATTACAACTCAACGAAGTTTTTGAACGAGAGGGATCGACATATGGAGACTATTTTAGGCTCCAGCAATCCAAATTAG 1434 0.3898 MSDEQREPPPPQPSSSSNDVHKPERKLFDKKESTKIRGRRPRPGFSDSFSNIDLSVLEIELEGSQSEYSPRSQESDTPSSRASTSDSEGGLRGGLNNNQWRGFFKLIKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALQSSFDSEFICFKSLWKNFTLLEIQAATNDFSPDNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSLLYGPREKLNWSLRFKITLGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSSNKIKELVDPILGDAYDEEQMKLVLQILRGEEESLRMLKERQKSKLHRTYSEELFDAEDYNSTKFLNERDRHMETILGSSNPN* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4268 477 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 31 460 - -
Mal4g4268 477 Pfam Protein tyrosine and serine/threonine kinase 182 386 IPR001245 GO:0004672|GO:0006468
Mal4g4268 477 SUPERFAMILY Protein kinase-like (PK-like) 159 419 IPR011009 -
Mal4g4268 477 MobiDBLite consensus disorder prediction 65 94 - -
Mal4g4268 477 Gene3D Phosphorylase Kinase; domain 1 143 252 - -
Mal4g4268 477 MobiDBLite consensus disorder prediction 63 96 - -
Mal4g4268 477 Gene3D Transferase(Phosphotransferase) domain 1 255 453 - -
Mal4g4268 477 ProSiteProfiles Protein kinase domain profile. 178 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4268 477 MobiDBLite consensus disorder prediction 19 42 - -
Mal4g4268 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Mal4g4268 477 SMART serkin_6 178 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4268 477 ProSitePatterns Protein kinases ATP-binding region signature. 184 206 IPR017441 GO:0005524
Mal4g4268 477 PANTHER OS08G0249100 PROTEIN 31 460 - -
Mal4g4268 477 MobiDBLite consensus disorder prediction 1 16 - -
Mal4g4268 477 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4268 Mal-Chr4 119850936 119854032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4268 149 421 Receptor kinase-like Gene Family AT1G53420 40.925 3.81e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mal4g4268 PK_Tyr_Ser-Thr 9.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4268 - - lja:Lj6g3v1915960.1 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4268 4 119850936 119854032 Mal4g4268 4 119850936 119854032 ECH
Mal4g4268 4 119850936 119854032 Mal1g1392 1 18005711 18008929 ECH
Mal4g4268 4 119850936 119854032 Mal3g4965 3 129691269 129695113 ECH
Mal4g4268 4 119850936 119854032 Mal1g1801 1 23591281 23593777 ECH