Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4262 ATGGCATCACTGGTTGTCAGTGGTAGCAGTCAAATGTCTTCTTCGATTTCTGTCCAAGAAAAAGGAAGTAGGAATAAGAGAAAATTCCGGGCCGATCCACCATTAGGGGAGTCAAGTAAGAGTATATCTTCACCTCAACATGAGAGTCTAAGTTATGAATTCTCTGCTGAAAAAGTCGAACTGATCCCAACATATGGGCAACTCACCCCAACTTATGGGCAAGTCACAGCTTCTGACTTGTGCAGTGTTCGCCATGATTGTTCTGATGGCTTGAAGCTTGACCTTGGATTATCTAGTTCTGCAGTTTCATCTGAGGTTAGGCTTAGCCAATCTAAGGAGGAACTAGAGGTGGTTAAATCCCATGGTGCTGTTTGGAGTGATCACACAGAAACTCAGTTGCAAGAACTTGTCTTGAGCAATTTGCAAACCATTTTCAAGAGTGCAATAAAAAAAATTGTTGCTTGTGGCTACACTGAAGATGTTGCTACAAAGGCTATGTTAAGACCTGGCATCTGTTATGGATGCAAAGACACTGTGTCTAATATAGTTGACAACACCTTAGCTTTTTTGAGAAACGGTCAAGAGTTTGATCCTTCACGAGAGCACTCTTTTGAAGATTTAGCCCAGCTTCAGAATTATATCTTGGCCGAATTGGTTTGTGTTCTTCAAGAAGTTAGGCCATTTTTCAGTGTTGGGGACGCAATGTGGTGTTTGTTAATTTGTGACATGAACGTGTCACATGCTTGTGCAATTAATGGCGACCCTTTAAGTAGTTTATGCAGTGATGGCATAGGTGATGGCTCTTCTTCTGTCCAGACTGAATCACAGTCAAAAGTTGAAACAAAAAGTTCTGAGTTGAGTCTTCCAAGTCCTTGTAATTCAATTCCCTCGGGTTCTCAATCTGAGAAATCCTTTGTGGTGGAAAAATCTCAAATTCCCGGTGGACTCACGGAGAAACAGGGTGCTGATTCTGGATGTCATCCTGTTGACAAGCCATCTAGTGCATCTGGAACCTCTCAATCTCCCCTTCTACAAGAAAAGTGTGGGAGTGTTAGAAAGGTCCATTCGAGTAGCACCAAGAGGGAGTACATTTTTCGTCAGAAGTCAATCCATGTGGAAAAAAGTTATCGGACATACGGGTCTAAAGGGTCTTCAAGAGGAGGGAAGCTGAGTGGATTGAGTGGTTTGATCTTGGATAAGAAACTTAAATCAGTATCAGAATCTACTACCATAAACTTAAAGAGTGCTTCTATAAACATAAGCAAGGCAGTGGGAATTGATGTCACTCAAGACAATCTTAACACCAATTTCTCATCTAATGATGGACCATCTACACCTGCATCACTTAGCCTGGATTCTAGTGATACTATTTATCGTGCAGCTGATTCTTCATCTTCAGAACATGAAGCAACTCCTATACCTGCAGTCAGTAGCCCCCCAGACGCATTATCAGCTACAGACACTGACCTTTCCCTTTCATTGTCTTCAAAAGGAAATTCTTCTACAACTCCTATCTGCTGCAGTAACAAGTCACATAGTAGTAGTTGTGTGGGGATACCATATGACAAGTCCATGGGACAATGGGTGCCCCAAGATAGAAAAGATGAGCTGATTTTGAAAATGGTTCCAAGGGTTCGGGAGCTGCAAAATGAGCTTCAAGAATGGACGGAATGGGCAAATCAGAAGGTGATGCAAGCTGCTCGTCGGTTGAGTAAGGACAAGGCTGAGCTTAAGACACTAAGGCAAGAGAAAGAAGAAGTTGAACGACTTAAAAAGGAGAAACAATGCCTAGAAGAAAACACCATGAAAAAGCTTTTTGAGATGGAAAATGCCTTGGGTAAAGCAGGTGGACAAGTGGAACGAGCTAACACTGCAGTACGGAAGCTCGAGATGGAGAATGCTGCATTGAGGAAAGAGATGGAGGCTGCTAAGTTACGTGCGTCGGAATCAGCAACAAACTTTCAAGAGGTCTCTAAGAGGGAAAAGAAGACCCAAATGAAGTTTCAATCATGGGAGAACCAGAAATCCTTGTTACAGGAAGAGCTAATGACTGAAAAAAACAAATTGGCACATATATCAAAGGAATCAAAGCAAGCTGAAGTGCAAGCGGAGCAATTCGAGGCTAAACGGCAGCAGGCAGCAAAGAAAACAGAAGAACTTCTCTCCCTGGCCAGTTCTATAAGAAAAGAAAGAGAACAAATCGAGGAGTCAGCCAGAGCCAAGGAGGAGAGGATCAAATTGGAAGCAGAGAAGGAGCTGCGAAGATACAAAGATGACATCCAGAAACTTGAAAAAGAAATTGCACAAATAAGACAGAAGTCCGATTCTTCGAAAATTGCTGCACTAAAAAGAGGAATTGATGGAAGCTATGCCGGTAGCTGGAAGGACACAAAAAAGGGTTCTGGTTTTGAAGAACCCCACACCGCGTCTATTTCAGAACTGGTTCAAAAGTTAAATAACTTCTCTATGAATGGAGGAGGTGTGAAAAGGGAATGGGAGTGCGTGATGTGCCTTTCGGAAGAGATGTCTGTTGTATTTCTTCCATGTGCTCATCAAGTTGTTTGCACAAAGTGCAATGAGCTCCATGAGAAGCAGGGAATGCAAGACTGTCCTTCTTGCAGGAGCCCCATCCAGGAGCGAATTTCTGTGCGTTATGCGCGTACATAA 2667 0.4282 MASLVVSGSSQMSSSISVQEKGSRNKRKFRADPPLGESSKSISSPQHESLSYEFSAEKVELIPTYGQLTPTYGQVTASDLCSVRHDCSDGLKLDLGLSSSAVSSEVRLSQSKEELEVVKSHGAVWSDHTETQLQELVLSNLQTIFKSAIKKIVACGYTEDVATKAMLRPGICYGCKDTVSNIVDNTLAFLRNGQEFDPSREHSFEDLAQLQNYILAELVCVLQEVRPFFSVGDAMWCLLICDMNVSHACAINGDPLSSLCSDGIGDGSSSVQTESQSKVETKSSELSLPSPCNSIPSGSQSEKSFVVEKSQIPGGLTEKQGADSGCHPVDKPSSASGTSQSPLLQEKCGSVRKVHSSSTKREYIFRQKSIHVEKSYRTYGSKGSSRGGKLSGLSGLILDKKLKSVSESTTINLKSASINISKAVGIDVTQDNLNTNFSSNDGPSTPASLSLDSSDTIYRAADSSSSEHEATPIPAVSSPPDALSATDTDLSLSLSSKGNSSTTPICCSNKSHSSSCVGIPYDKSMGQWVPQDRKDELILKMVPRVRELQNELQEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEVERLKKEKQCLEENTMKKLFEMENALGKAGGQVERANTAVRKLEMENAALRKEMEAAKLRASESATNFQEVSKREKKTQMKFQSWENQKSLLQEELMTEKNKLAHISKESKQAEVQAEQFEAKRQQAAKKTEELLSLASSIRKEREQIEESARAKEERIKLEAEKELRRYKDDIQKLEKEIAQIRQKSDSSKIAALKRGIDGSYAGSWKDTKKGSGFEEPHTASISELVQKLNNFSMNGGGVKREWECVMCLSEEMSVVFLPCAHQVVCTKCNELHEKQGMQDCPSCRSPIQERISVRYART* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4262 888 MobiDBLite consensus disorder prediction 481 499 - -
Mal4g4262 888 MobiDBLite consensus disorder prediction 1 20 - -
Mal4g4262 888 Coils Coil 563 600 - -
Mal4g4262 888 Coils Coil 619 646 - -
Mal4g4262 888 MobiDBLite consensus disorder prediction 1 47 - -
Mal4g4262 888 PANTHER OS05G0141500 PROTEIN 5 887 - -
Mal4g4262 888 MobiDBLite consensus disorder prediction 331 346 - -
Mal4g4262 888 Pfam Family of unknown function (DUF6592) 140 251 IPR046527 -
Mal4g4262 888 MobiDBLite consensus disorder prediction 458 472 - -
Mal4g4262 888 MobiDBLite consensus disorder prediction 458 499 - -
Mal4g4262 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 813 884 IPR013083 -
Mal4g4262 888 Coils Coil 668 780 - -
Mal4g4262 888 SUPERFAMILY RING/U-box 815 881 - -
Mal4g4262 888 Pfam Zinc finger, C3HC4 type (RING finger) 833 879 - -
Mal4g4262 888 ProSiteProfiles Zinc finger RING-type profile. 834 874 IPR001841 -
Mal4g4262 888 MobiDBLite consensus disorder prediction 270 307 - -
Mal4g4262 888 PANTHER OS05G0141500 PROTEIN 5 887 IPR046934 -
Mal4g4262 888 MobiDBLite consensus disorder prediction 270 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4262 Mal-Chr4 119748196 119751407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4262 834 883 C3H Transcription Factor Family AT1G73950 44.000 6.27e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4262 - - gmx:100777140 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4262 4 119748196 119751407 Mal4g4262 4 119748196 119751407 ECH