Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4258 ATGGGTTGTGTTCATGGAAAGTGTTGTAGCCGTTACCCTGCACCATCAATTGGTGGCTCTAGGGACTATAGAGAACCTGTCCCTAGGAAGCACTTACTCACACAAAGATCACTTCACTTTGTTGATGTTGCTTCACACAATTTCACTATGGAATACTCTGTTCTCACTCAGAGAGGTTACTATCCTGACTCACCTGATAAGGAAAATCAAGATTGTTACTGTGTTAGGACACAATTGCAAGGTAATCCTAGTGTTCATTTCTTTGGTGTTTTTGATGGACATGGTGAATTTGGTGGACATTGTTCCAATTTTGTTAAGAATAGGTTGGTTGAAAAATTGTCAAATGATTCTGCATTGTTAGAGGATCCTGTTAAGGCTTATAATTCAGCTTTTTTAGCTACTAATGATGATTTACATAAGAATGAGATTGATGATTGTATGAGTGGCACTACCGCGATTACGGTGTTGGTTATAGGTGATACACTTTATGTTGCTAATGTTGGTGATTCGAGGGCGGTGTTGGCTGTTAAGAATGGGAATAGAATTGTTGCTGAGGATTTGTCTTCTGATCAGACACCATTTAGGAGAGATGAATATGAGAGAGTGAAGCTTTGTGGTGCTAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCTGATATTCAGACTTGGGGTGATGAAGAGAGTCAGGGTGATGATCCTCCTAGATTGTGGGTTCAGAATGGGATGATTCCTGGTGCTGCTTTTACAAGGAGTGTGGGGGATAGTTTGGCTGAGACTATTGGTGTTATTGCGGTTCCGGAGGTGTTAACGGTTCAGCTTAAGCCGGATCATCTTTTCTTTGTTGTTGCAAGTGATGGTGTATTTGAATTCCTATCAAGCCAAACTGTTGTTGATATGGCTTCAAGTTATTCAGATCCCCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAATTATGGTTGGAACATGAGGGTCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCTCATTCAGGTACATCTGAGTACGGATCAGGAGAGATCAATGTCAGTACTATAACGAGGGCCAAAAAGGGAAAGGGAACTTCTGGTATATCTGCTACCACCGGTTTGGATGTTCATCGTGCTGTGACAAATGGTTTCTCTGATTCGCTATCCGGTCAACATGTGGTCTCATCGAGAAGCCACGCCATAGTAGTTCCCACTCCCACATGTCAAAGTCCAGTTGAATTGGTAGAGTCTTAG 1272 0.4214 MGCVHGKCCSRYPAPSIGGSRDYREPVPRKHLLTQRSLHFVDVASHNFTMEYSVLTQRGYYPDSPDKENQDCYCVRTQLQGNPSVHFFGVFDGHGEFGGHCSNFVKNRLVEKLSNDSALLEDPVKAYNSAFLATNDDLHKNEIDDCMSGTTAITVLVIGDTLYVANVGDSRAVLAVKNGNRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMIPGAAFTRSVGDSLAETIGVIAVPEVLTVQLKPDHLFFVVASDGVFEFLSSQTVVDMASSYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSHSGTSEYGSGEINVSTITRAKKGKGTSGISATTGLDVHRAVTNGFSDSLSGQHVVSSRSHAIVVPTPTCQSPVELVES* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4258 423 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 30 379 - -
Mal4g4258 423 SUPERFAMILY PP2C-like 39 343 IPR036457 -
Mal4g4258 423 ProSiteProfiles PPM-type phosphatase domain profile. 51 341 IPR001932 -
Mal4g4258 423 CDD PP2Cc 67 341 IPR001932 -
Mal4g4258 423 Pfam Protein phosphatase 2C 78 316 IPR001932 -
Mal4g4258 423 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Mal4g4258 423 Gene3D - 37 343 IPR036457 -
Mal4g4258 423 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 30 379 - -
Mal4g4258 423 SMART PP2C_4 47 339 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4258 Mal-Chr4 119666058 119669067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4258 1 346 PP2C-type Phosphatase Gene Family AT3G06270 72.493 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4258 - - mtr:MTR_2g020970 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4258 4 119666058 119669067 Mal4g4258 4 119666058 119669067 ECH
Mal5g4735 5 120469207 120471597 Mal4g4258 4 119666058 119669067 PCT