Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4251 ATGATTGTAAAGGAACATCCTGTTGGTACTGAACTGGTAATGAGTAATGCAAATGGGGATGATGAGATTGATTTTTCTTGTGATCCATACATAGGGTTAGAGTTTTTCAATGCGGATGATGCACTTAAGTTCTATATATCGTATGGTAACCGAATGGGGTTTAAAGTTCGGATTGGTCAGCTTTATCGATCAAGAACTAATGGGTCGGTTTCTTCTCGAAGATTTGTGTGCTCTAAGGAGGGACATCAGCTCAGCTCAAGAACTGGATGTCCGGCATTCATAAGGGTACAATTAAATGATTCTGGAAAGTGGGTTGTTGATCATTTTCATAAGGATCATAATCACACTCTTGAAAATGAAAGTGAAAGTTTCACTCCAACATTGCAGCCGAATGCTTTTGCAGCTATTGAGTCTTCTACTGAAGTGACTCGCAAGCCGAGGAAGAAAATGCTTCAAGTAGGGAATGGTGAACCTATTTCTCCCTTTGGCGTTATTAATTTCAAGCGTCTGAGAAAAGAAGAACTTGAAGTACAGGCCAGGATCGAACCATATGTTGGTCAAGAGTTCAGTACCCCTAATGAAGCCTACCAATTTTATCATGCTCATGCAGCATATTTGGGTTTTGGAATTCGAGTTGGTCAATTGTTTCGTTCTAAAAATGATGGATCGGTTACATCACGACGCTTCGTGTGCTCAAAAGAAGGGTTCCAGCACCCTTCAAGAGTTGGCTGTAAGGCTTATTTGAGGATTAAGAATCAACCATCAGGAAAGTGGGTAGTCGACCGTCTTGAAAAAGATCATAATCATGATCTGGGCCTTGAAAAGGAACGTAGGACAAAAATTCTTCCTGCTTCCAACATTTTGACTGAGGAGGTAAACACTGAATTGCTGAATGGCGACATATTTAGGATAGATAACTACCCTGTCCTAAGAGGAGGCAGACAAAATCACATTAGAAGTGATTGGTACAACATGCTTTTAGAGTATTTTCAGTCAAGGCAAGCAGAAGATACAGGATTCTTTTATGCCATGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGACGGAAGATCTAGATACTCATGTAGTCAGTTTGGTGATGTCCTCGTTGTAGATACATCATATAGAAAGAGTGTCTATATGGTACCGTTTGCAACTTTTGTTGGAGTTAACCACCACAAGCAACCTGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAAGAATCTTTCACTTGGTTGTTTCAGACATGGGTAAGAGCAATGTCTGGCCGGCAGCCTCTGTCAGTAATAGCTGATCAAGACGTTTCAATCCAGAGGGCAATAGCAAAAGTGTTTCCTGTAACCAATCATCGCTTTTCACTGTGGCAAATTAATGCAAAGGAACAAGAGCTCGCTGGTCTGATGGGTAATGGATTCACTAAAGATTATGAAAAGTGTGTTTACCAGAGCCAGACAGTTGATGAATTTGACGCCGCATGGAATGCTATACTCGTCAAATATGGATTGAAGGACAATGTTTGGCTGAAAGAAATGTATGAGAAGCGTGCATCCTGGGTTCCGTTCTATTTAAAGGGCACATTTTCTGCTGGAATTCCTATGAAAGAAAGCATGGAATCATTCTTTGGTGGAGTTTTAAATGGCCAAACACCTCTCACAGAGTTCATTCCGCGTTATGAAAGAGGTCTTGAGCGACGTCGTGAAGAAGAAAGAAAAGAGGATTTTAATACTTCCAATTTTCAAACTTTTTTGCAAACGAAAGAACCAGTAGAAGAACAATGTAGAAGGCTTTACACTCTTGCAGTATTCAAAGTATTTAAAAAAGAGCTTTTGCAGTGCTTTAGTTATCTTGGGTTTAAAATCTACGAAGAAGGGCCCCTCAGCAGATATATGGTGCGTAAGTGTGGAAATGATGATATGGAGAAGCATGTTGTTACATTCAATGCATCTAATCTTGACATTAGTTGTAGCTGTCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACATGTGTTGAGGGTTTTTCAAATATTGGAAATAAGAGAAGTTCCTTCTCGCTACATCTTACATCGATGGACTAGAAATGCTGAGGATGGTGTTTTTCCTGACATAGGATCATGGAGTAGCTCTCAGGAGCTAAAAAGTTTGATGGTGTGGAGTCTAAGAGAAACAGCATCTAAATACATAGATGCCGGTGCATCATCCATCGAAAAGTATAAACTTGCCTATGAGATTTTGCGAGAGGGTGGCAGAAAACTGTGTTGGCACAGGTGGAAGCACTTCCCTATAAGTTTCCTTCTCCAAGTCCAAAGAAACAATAGTCCAAAAAGAACTTGA 2349 0.4014 MIVKEHPVGTELVMSNANGDDEIDFSCDPYIGLEFFNADDALKFYISYGNRMGFKVRIGQLYRSRTNGSVSSRRFVCSKEGHQLSSRTGCPAFIRVQLNDSGKWVVDHFHKDHNHTLENESESFTPTLQPNAFAAIESSTEVTRKPRKKMLQVGNGEPISPFGVINFKRLRKEELEVQARIEPYVGQEFSTPNEAYQFYHAHAAYLGFGIRVGQLFRSKNDGSVTSRRFVCSKEGFQHPSRVGCKAYLRIKNQPSGKWVVDRLEKDHNHDLGLEKERRTKILPASNILTEEVNTELLNGDIFRIDNYPVLRGGRQNHIRSDWYNMLLEYFQSRQAEDTGFFYAMEVDNGNCMSIFWADGRSRYSCSQFGDVLVVDTSYRKSVYMVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWVRAMSGRQPLSVIADQDVSIQRAIAKVFPVTNHRFSLWQINAKEQELAGLMGNGFTKDYEKCVYQSQTVDEFDAAWNAILVKYGLKDNVWLKEMYEKRASWVPFYLKGTFSAGIPMKESMESFFGGVLNGQTPLTEFIPRYERGLERRREEERKEDFNTSNFQTFLQTKEPVEEQCRRLYTLAVFKVFKKELLQCFSYLGFKIYEEGPLSRYMVRKCGNDDMEKHVVTFNASNLDISCSCQMFEYEGVLCRHVLRVFQILEIREVPSRYILHRWTRNAEDGVFPDIGSWSSSQELKSLMVWSLRETASKYIDAGASSIEKYKLAYEILREGGRKLCWHRWKHFPISFLLQVQRNNSPKRT* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4251 782 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 120 IPR031052 GO:0006355
Mal4g4251 782 Pfam MULE transposase domain 371 464 IPR018289 -
Mal4g4251 782 Pfam SWIM zinc finger 652 680 IPR007527 GO:0008270
Mal4g4251 782 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 24 120 - -
Mal4g4251 782 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 146 758 - -
Mal4g4251 782 SMART 26again6 658 685 IPR006564 GO:0008270
Mal4g4251 782 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 146 758 IPR031052 GO:0006355
Mal4g4251 782 ProSiteProfiles Zinc finger SWIM-type profile. 647 683 IPR007527 GO:0008270
Mal4g4251 782 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Mal4g4251 782 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4251 Mal-Chr4 119547007 119552144 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g4251 MULE 3.1e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4251 - - gmx:100816656 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4251 4 119547007 119552144 Mal4g4251 4 119547007 119552144 ECH