Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4204 ATGATTATCCCAGTGCCAGCAACATCATCCTCTGCCTGCAAACAAGAACTGCCCCTAATAAATTACCAAAAGGGACTCAACAAAATGGAGTCTTTATTTCACAACCGAAACAAAGATAAGGTGCTAGTAATTATGGGGGCCACAGGAACTGGAAAGACCAAATTAGCCATAGATTTGGCCAAACATTTTCAACCAGCTGAAATTGTGAATTCAGATAAAATGCAAGTTTACAAAGGTCTTGACATTACAACAAATAAGGTGACAGAACAAGAGTGTGATGGGGTCCCACACCATCTCTTGGGTGTATTTGATCCTACCACAAATTTCACTGCCAATGATTTTTGTTACCATGCTTGTTCAGCTATTGATTCAATTGTGGAAAAAGATGGATTACCCATTATTGCTGGTGGATCAAATTCTTACTTAGATACCTTAGTGAACCATTGTACTGAATTTAGGTTAAGGTACGAGTGTTGTTTTCTTTGGGTTGATGTTTCACTACCTGTTCTTCATTCTTCACTTCAATCGCGCGTTGATCGCATGATTGAAGCTGGTCAAATTGATGAAGTTCGTGATTTTTTTGACCCTTTGGGTGATTATACAAAAGGGATTCGTAGAGCTATTGGGGTGCCAGAATTTCACGACTTTCTTGTAGCGGAAGCAAATTCAGCGGACGAGAGAACTAAGAAGAGGCTTCTTGAAGCTGCCATTGCTAGGGTCAAGATTAATAATTGCACGCTTGCGAATCGACAAACTCAAAAGATTCGTCGGTTAAATGGGATGTGGAAAAGGAGTATACATCGTCTCGATGCCACTGAAACGCACCTTAAGAGTGGTTCACGTGCTTGTAAGGAAGCTTGGGAGGATCATGTGCTTGCAAAAAGTCTTGTGATCCTTTACAACTTCCTTTATGGTGAAACGCATGTTCGTTCAAGAAATGTTTCACCAAAAGATATAATCTCTAACCTTTCTATGTCACGGCAAACACTATCGTTGCCAGCTGTTGCGGTGGCTACTCATTAG 1023 0.4066 MIIPVPATSSSACKQELPLINYQKGLNKMESLFHNRNKDKVLVIMGATGTGKTKLAIDLAKHFQPAEIVNSDKMQVYKGLDITTNKVTEQECDGVPHHLLGVFDPTTNFTANDFCYHACSAIDSIVEKDGLPIIAGGSNSYLDTLVNHCTEFRLRYECCFLWVDVSLPVLHSSLQSRVDRMIEAGQIDEVRDFFDPLGDYTKGIRRAIGVPEFHDFLVAEANSADERTKKRLLEAAIARVKINNCTLANRQTQKIRRLNGMWKRSIHRLDATETHLKSGSRACKEAWEDHVLAKSLVILYNFLYGETHVRSRNVSPKDIISNLSMSRQTLSLPAVAVATH* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4204 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 198 IPR027417 -
Mal4g4204 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 309 IPR039657 -
Mal4g4204 340 Pfam IPP transferase 155 257 - -
Mal4g4204 340 Pfam IPP transferase 75 149 - -
Mal4g4204 340 Gene3D - 38 303 IPR027417 -
Mal4g4204 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 167 266 - -
Mal4g4204 340 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 31 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4204 Mal-Chr4 118904394 118905416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4204 155 323 C2H2 Transcription Factor Family AT2G27760 32.821 4.32e-20 89.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4204 4 118904394 118905416 Mal4g4204 4 118904394 118905416 ECH
Mal5g4690 5 119841900 119842895 Mal4g4204 4 118904394 118905416 PCT