Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4198 ATGTCTCACATAGCTGTTGAGAGGAACAGGAGAAGACAGATGAATGAACATCTCAAGGTTTTAAGGTCGTTGACCCCTTGTTTCTATATTAAAAGGGGAGACCAAGCATCAATAATAGGTGGAGTTATAGAATTCATCAATGAATTGCACCAAGTTCTTCAAGCTTTGGAGTCCCAAAAGAGAAGGAAGAGTTTAAGCCCTAGTCCCGGTCCAAGTCCAAAAACACTGCAACCAAAATTTCATCAATTTGATATCTCCTCCGGAGGAATTGGGACTAATGCTTTCAAGGAACTAGGAGCAAGTTGCAATTCTTCAATTGCAGATGTAGAAGTTAAAATCTCGGGTCCAAACGTGATTTTAAGAGTAATTTCTCAAAGGATTCCAGGTCAAGTTTCAAGGATTATAACTGTTTTAGAAAGTCTTTCATTTGAAGTTCTTCATCTTAACATCAGTAGCATGGAAGAGACGGTTCTATACCAATTTGTTGTCAAGATAGAGCTGGGATGTCAACTAAGTTTGGAGGAACTAGCTATGGAAGTACAACAAAGCTTTTGCTCAGAGACTATGAAGTTGAATGCTGTTTGA 585 0.3863 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFINELHQVLQALESQKRRKSLSPSPGPSPKTLQPKFHQFDISSGGIGTNAFKELGASCNSSIADVEVKISGPNVILRVISQRIPGQVSRIITVLESLSFEVLHLNISSMEETVLYQFVVKIELGCQLSLEELAMEVQQSFCSETMKLNAV* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4198 194 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Mal4g4198 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 67 IPR036638 GO:0046983
Mal4g4198 194 PANTHER TRANSCRIPTION FACTOR MUTE 1 191 - -
Mal4g4198 194 SMART finulus 4 55 IPR011598 GO:0046983
Mal4g4198 194 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Mal4g4198 194 Gene3D - 1 64 IPR036638 GO:0046983
Mal4g4198 194 PANTHER TRANSCRIPTION FACTOR FAMA 1 191 IPR044283 GO:0003700|GO:0010052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4198 Mal-Chr4 118699844 118701858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4198 1 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.667 1.89e-83 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g4198 HLH 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4198 - - mtr:MTR_2g022280 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4198 4 118699844 118701858 Mal4g4198 4 118699844 118701858 ECH