Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4158 ATGAAGGTTGGCTCAGTTGGTAAGGAGTTGGGTTCACCTGCAAGGTCGTGTGTTCAACTCCCGCTGCCGATGCAAAAGAACGACGATGTAAATAGAGCAGTGACACAAAAACTGCTTCAGAAACTAGGTTGTTCCGTGACTTCTGCTTCTACAGGATTCGGATGCTTTACCGTCATTGAACCTGTCGGATCTTCCATCCAAGTCATTCTTTTGGATCTCCAAATGCCTGATATCGATGGCTTTGAAGTTGCTTAA 255 0.4549 MKVGSVGKELGSPARSCVQLPLPMQKNDDVNRAVTQKLLQKLGCSVTSASTGFGCFTVIEPVGSSIQVILLDLQMPDIDGFEVA* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4158 84 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 84 - -
Mal4g4158 84 SUPERFAMILY CheY-like 28 84 IPR011006 -
Mal4g4158 84 PANTHER ETHYLENE RESPONSE SENSOR 2 24 84 - -
Mal4g4158 84 Gene3D - 27 84 - -
Mal4g4158 84 ProSiteProfiles Response regulatory domain profile. 21 84 IPR001789 GO:0000160
Mal4g4158 84 Pfam Response regulator receiver domain 28 83 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4158 Mal-Chr4 118092615 118093565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4158 20 84 Miscellaneous Gene Families AT3G04580 53.846 1.35e-19 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal4g4158 Response_reg 3e-07 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4158 K14509 - gmx:100802948 94.7449