Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4149 ATGACTTATTTTCGATGCTGCTGCAAATCCAATGTTGAATCACCCTCTTACAAAAGATGTTCCAATGATGTTTCCAAAGGAAGAAGAACATTCAAATCATTAGCAGCTGCTATGTCACTCAAAACAGGTAGCAGCAGGCATAGACAAATTACAGCAGAAATACTAAAATATGGAGCTGCAAAAAATGATGTTAAAACATTCACATATGAAGAAATTGCTGATGCAACAAACAACTTCAGTTCTGATTGTCTTGTGGGAGAAGGTGGATTTGGGAATGTGTATAAAGGATACATGAAGAACATTGAACAAAATGTAGCTGTGAAGACTCTGAACAGAGATGGGAATCAAGGAACAAGAGAATTTTTTGCAGAAATTTTAATGTTGAGTATGGTGAATCATCCAAATCTAGTGAAGCTTGTTGGTTATTGTGTAGAAGATGATCAAAGAATTTTAGTTTATGAGTACATGGCCAATGGAAGCTTGGAAAATCACCTTCTAGATATAGGTAATGATAAGGAACCATTGGATTGGCAAACAAGGATGAAAATTGCCGACGGAGCAGCAAGAGGACTTGAATATCTGCATAATTCAGCAGATCCACCGGTGATTTTTCGCGATTTTAAATCGTCTAATATACTATTAGATGAAGATTTCAATCCAAAGCTTTCTGATTTTGGACTTGCTAAGATTGCTCCAAGAGAGGGTGAGGGCTTAGTCAAAACTAGGGTTATGGGGACTTATGGCTATTGTGCACCAGAATATGTTGCTACTGGTCATTTAACCTCAAAGTCAGATATTTATAGTTTTGGTGTTGTGTTTTTGGAAATAATCACTGGTAGGAGAGTAATTGACCCTGCAAGAGATTCAGAAGAACAAAACTTGATTGATTGGGCACAACCTTTGTTTGAGGATAGAGCAAAGTTCAATCTAATGGCTGATCCTTTGCTTAAAGGAAAGTTCCCTGTAAAGGGACTATTTCAAGCCCTCGCAGTGGCAGCAATGTGTCTACAAGAAGAAGCCGACACGCGACCGTACATGGATGACGTCGTAGAGGCTCTTCATCATCTAGTAGTACACAAGACTGAAGAAAAAGACATGGCTGGTGAATCTCTAAAAAGTGCTGGTCATGTTGAATCTTTTAGAGCTGCAAGTTCATTTGGAGCTGAAAGGGCAAAATAG 1179 0.3851 MTYFRCCCKSNVESPSYKRCSNDVSKGRRTFKSLAAAMSLKTGSSRHRQITAEILKYGAAKNDVKTFTYEEIADATNNFSSDCLVGEGGFGNVYKGYMKNIEQNVAVKTLNRDGNQGTREFFAEILMLSMVNHPNLVKLVGYCVEDDQRILVYEYMANGSLENHLLDIGNDKEPLDWQTRMKIADGAARGLEYLHNSADPPVIFRDFKSSNILLDEDFNPKLSDFGLAKIAPREGEGLVKTRVMGTYGYCAPEYVATGHLTSKSDIYSFGVVFLEIITGRRVIDPARDSEEQNLIDWAQPLFEDRAKFNLMADPLLKGKFPVKGLFQALAVAAMCLQEEADTRPYMDDVVEALHHLVVHKTEEKDMAGESLKSAGHVESFRAASSFGAERAK* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4149 392 Gene3D Phosphorylase Kinase; domain 1 36 155 - -
Mal4g4149 392 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Mal4g4149 392 Gene3D Transferase(Phosphotransferase) domain 1 156 378 - -
Mal4g4149 392 CDD STKc_IRAK 85 353 - -
Mal4g4149 392 PANTHER OS07G0668900 PROTEIN 6 389 - -
Mal4g4149 392 Pfam Protein kinase domain 84 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4149 392 PANTHER RECEPTOR SERINE/THREONINE KINASE 6 389 - -
Mal4g4149 392 ProSiteProfiles Protein kinase domain profile. 79 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4149 392 SUPERFAMILY Protein kinase-like (PK-like) 64 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4149 Mal-Chr4 117937907 117939707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4149 65 356 Glycoside Hydrolase AT3G07070 62.329 7.43e-135 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal4g4149 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4149 - - gmx:100305361 612.068