Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4132 ATGTCGACGGTGTACGTTTTGGAACCACCGACTAAGGGAAAAGTGATCGTGAACACCACGCGCGGCCCTATCGACATTGAACTATGGCCAAAAGAAGCTCCAAAAGCCGTTAGAAACTTCGTTCAACTCTGCCTCGAAGGTTACTACGACAACACCATCTTCCACCGTGTTATCAAAGACTTTCTCGTTCAGTGCGGCGATCCCACCGGCACCGGCACCGGTGGTGAGAGTATTTATGGAGATGTTTTTGGTGATGAGTTTCATTCGAGGATTAAGTTTAAGCATAGAGGTTTGGTTGCTATGGCGAATTCTGGAACTCCCAATTCTAATGGAAGTCAGTTTTTTATTACTCTTGATCGCTGTGATTGGCTTGATCGGAAGCATACAATTTTCGGAAAGGTGACAGGAGATACAATGTATAACCTGTTAAGACTCGGTGAAGTTGAGACTGATAAGAATGATCGGCCATTAGATCCAGCCCCAAAGATATTATCAGTTGAGGTGTTGTGGAATCCATTTGAAGACATCGTTCCAAGAACACTTCAGAAACCTCAGACCAAAGCTACACGTGATGGTGATACGGAGGGTAAAAATGCAAAGAGGAAAGGTGTAAAAAATTTGAGCTTGCTTTCATTTGGGGAAGAAGCTGAAGAAGAGGAAAAGGAATTAGCAGTGGTGAAGAAAAAGATTGTGAGCAGTCATGATGTCTTGAATGATCCTCGTCTTCTAAAGGATGAAAATGCTAATAATGAATTGAGTTCATCTGACAGTAAAATAAAAAGGGACCAGCAGTTATCTGTAAGGGATGCACTTAGCTCAAAAAAAGAAGAGCCTCAGAAAGATTCAGGAGCTGATAAATTGGCTCATCTTGGTTCCAGTGATGATGATGAAGCAGATTTTGATTCAAGAATGCGCATGCAAATACTCAAAAAGCGGAAGGAACTGGATGATCTGCCGCCCAAACCAAAGCCGAAAAATGGAAGGTCCAGGTCCAGTCCAGAGAACCATACCGTGTCAAGAGCTAGGTCCACTTCTGTAAGTGCTGATGAGGATCAACCAAGAGTGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCCGAAGCAAGAGCTGAACGAATGGCTAATGCAGATACAGATATACAGCTTTTGAATGAAGCTGAGAGAGGAAGACATTTGCAGAAGCAGAAGAAACGCAGACTTCAAGGGCGTGAAGATGAAGTTCTGGCAAAACTTGAAAAATTTAAAACCAAGGTATCAGCAAAGGAGACACCCACAACTGTTGAATCTAAACCTGCTACTGATGAGTTAACTGACTGGAGTAGTGTTACCTTAAAATTTTCCCCCGGAGTTGGCAAGGACCACATGTCTCGCAAAGAGGATCCAAATGATTATGTTGTGCATGACCCACTTTTGGAAAAGGGGAAAGAGAAGTTTAATAAGATGCAAGCCAAACAAAAGAGAAGAGAACGGGAATGGGCTGGGAGATCCCTTACTTGA 1500 0.4287 MSTVYVLEPPTKGKVIVNTTRGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRVIKDFLVQCGDPTGTGTGGESIYGDVFGDEFHSRIKFKHRGLVAMANSGTPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPAPKILSVEVLWNPFEDIVPRTLQKPQTKATRDGDTEGKNAKRKGVKNLSLLSFGEEAEEEEKELAVVKKKIVSSHDVLNDPRLLKDENANNELSSSDSKIKRDQQLSVRDALSSKKEEPQKDSGADKLAHLGSSDDDEADFDSRMRMQILKKRKELDDLPPKPKPKNGRSRSSPENHTVSRARSTSVSADEDQPRVEKLSMKKKGIGSEARAERMANADTDIQLLNEAERGRHLQKQKKRRLQGREDEVLAKLEKFKTKVSAKETPTTVESKPATDELTDWSSVTLKFSPGVGKDHMSRKEDPNDYVVHDPLLEKGKEKFNKMQAKQKRREREWAGRSLT* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4132 499 MobiDBLite consensus disorder prediction 449 499 - -
Mal4g4132 499 MobiDBLite consensus disorder prediction 452 499 - -
Mal4g4132 499 MobiDBLite consensus disorder prediction 186 200 - -
Mal4g4132 499 CDD cyclophilin_CeCYP16-like 8 180 - -
Mal4g4132 499 MobiDBLite consensus disorder prediction 331 346 - -
Mal4g4132 499 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Mal4g4132 499 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 205 IPR044666 -
Mal4g4132 499 MobiDBLite consensus disorder prediction 347 375 - -
Mal4g4132 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Mal4g4132 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Mal4g4132 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Mal4g4132 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Mal4g4132 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Mal4g4132 499 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 205 - -
Mal4g4132 499 SUPERFAMILY Cyclophilin-like 14 185 IPR029000 -
Mal4g4132 499 MobiDBLite consensus disorder prediction 255 330 - -
Mal4g4132 499 MobiDBLite consensus disorder prediction 180 200 - -
Mal4g4132 499 Gene3D - 2 183 IPR029000 -
Mal4g4132 499 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
Mal4g4132 499 MobiDBLite consensus disorder prediction 241 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4132 Mal-Chr4 117658287 117666810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4132 9 173 U-box Gene Family AT5G67530 47.273 2.75e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4132 K12737 - gmx:100793148 764.222