Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4129 ATGCATCAAGAGCTTGGCCATCATGGTATTATTCATGGTAACATGAAATCCTCAAACATTTTGCTAAACAATAACATGGAGCCTTGTATAAGTGAATATGGTACTATGCCAAAAGATGACCAACAAAGTTCAACTTTTTCAACTCCTAGTGATGCGAATGCATTCAAAGAAGATGTTTATGGCTTTGGTGTTATTCTTCTTGAGCTACTTACTGGAAAATTGGTGAAGAGTAATGGTATTGATTTGACTGAATGGGTTCAATCAGTTGTAAGGGAAGAATGGACAGGTGAAGTGTTTGATAGGTCATTATTGAAAGAGTATGCAAGTGAAGAGAGGATGGTTAATATGCTTCAAGTTGCTATAAGATGTGTTAATAAATCCTTAGAGGCTAGGCCAAGTATGAGCCAAGTTGCTCTCATGATTAACACTATCAAAGATGATGAGGAAAAATCCTTGATTTACCAAGTTTGA 471 0.3609 MHQELGHHGIIHGNMKSSNILLNNNMEPCISEYGTMPKDDQQSSTFSTPSDANAFKEDVYGFGVILLELLTGKLVKSNGIDLTEWVQSVVREEWTGEVFDRSLLKEYASEERMVNMLQVAIRCVNKSLEARPSMSQVALMINTIKDDEEKSLIYQV* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4129 156 PANTHER OS10G0387400 PROTEIN 1 154 - -
Mal4g4129 156 Pfam Protein tyrosine and serine/threonine kinase 5 138 IPR001245 GO:0004672|GO:0006468
Mal4g4129 156 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4129 156 SUPERFAMILY Protein kinase-like (PK-like) 6 141 IPR011009 -
Mal4g4129 156 PANTHER OS05G0588300 PROTEIN 1 154 - -
Mal4g4129 156 Gene3D Transferase(Phosphotransferase) domain 1 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4129 Mal-Chr4 117594218 117594688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4129 10 145 Receptor kinase-like Gene Family AT3G08680 44.737 8.93e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal4g4129 PK_Tyr_Ser-Thr 3.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4129 - - mtr:MTR_2g023150 292.352