Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4121 ATGTTGGTCTCTTCCAAACCTTCATTACCTGATGCCTCTAACCTCTCTTTCCGTTCTGCTCTCAGCCCTTTTCAGATTCCTTCACAAAACTCATCATCTTCATGCACTCCTTCAAGACCCACCTCAATTCAGTGTGGTCTTAGAGAACTCAGAACCCGTATTGACTCTGTCAAAAACACTCAGAAAATCACTGAAGCAATGAAGCTTGTGGCTGCTGCTAAAGTCAGAAGAGCTCAAGAAGCTGTTGTTAATGGCAGACCTTTCTCACAGACACTTGTTGAAGTCCTTTATAGCATCAATGAACAGCTTCAAACCGACGATATCGAGGCTCCTCTCACTAAGCTTAGACCAGTGAAAAAAGTTGCTCTTGTTGTTTGCACAGGTGATAGAGGTCTCTGTGGTGGATTCAACAATGCAATATTGAAAAAAGCTGAAGCTAGAATTGCTGAGTTGAAAGGTCTTGGAGTTGATTACACTGTTATCAGTGTTGGTAAAAAGGGTAACTCTTATTTCCTTCGTAGACCTTATATACCTGTTGATAGGTTTCTTGAAGGTGGAACACTTCCTACTGCTAAAGAAGCACAAACTATTGCTGATGATGTTTTCTCACTCTTTGTTAGTGAAGAGGTTGATAAAGTTGAGCTTTTGTACACCAAGTTTGTGTCATTAGTGAAATCAGATCCTATAATTCATACTTTGCTTCCACTATCACCAAAAGGTGAAATCTGTGATATTAATGGAAACTGTGTTGATGCTGCTGAGGATGAGCTTTTCAGGCTAACAACAAAAGAAGGAAAGTTAACTGTTGAAAGAGATGCTATTAGGTCTAAGACCATCGCTTTTTCGCCGATTTTGCAGTTTGAGCAGGATCCAGTTCAGATTCTTGATGCACTTTTGCCACTTTATTTGAACAGTCAAATCTTGAGGGCGTTGCAGGAATCACTTGCTAGTGAATTAGCTGCTAGAATGAGTGCTATGAGTAGTGCTTGTGATAATGCTATTGAGTTGAAGAAGAATTTGTCAAGGGTTTACAATAGACAACGTCAAGCTAAGATCACTGGTGAAATCCTCGAAATTGTTGCCGGTGCTGATGCCTTAATATAG 1104 0.4022 MLVSSKPSLPDASNLSFRSALSPFQIPSQNSSSSCTPSRPTSIQCGLRELRTRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSQTLVEVLYSINEQLQTDDIEAPLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKGLGVDYTVISVGKKGNSYFLRRPYIPVDRFLEGGTLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPIIHTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDAIRSKTIAFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSACDNAIELKKNLSRVYNRQRQAKITGEILEIVAGADALI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4121 367 Gene3D - 109 237 - -
Mal4g4121 367 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 46 366 IPR035968 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 PRINTS ATP synthase gamma subunit signature 118 137 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 PRINTS ATP synthase gamma subunit signature 344 365 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 PRINTS ATP synthase gamma subunit signature 211 228 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 PRINTS ATP synthase gamma subunit signature 313 332 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 Gene3D ATP synthase, gamma subunit, helix hairpin domain 268 366 - -
Mal4g4121 367 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 46 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 Pfam ATP synthase 47 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 Gene3D ATP synthase, gamma subunit, helix hairpin domain 46 97 - -
Mal4g4121 367 Hamap ATP synthase gamma chain [atpG]. 44 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 PANTHER ATP SYNTHASE GAMMA CHAIN 1 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 ProSitePatterns ATP synthase gamma subunit signature. 352 365 IPR023632 -
Mal4g4121 367 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Mal4g4121 367 CDD F1-ATPase_gamma 47 363 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mal4g4121 367 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4121 Mal-Chr4 117412983 117414086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4121 23 366 Primary Pumps ATPases AT1G15700 71.014 4.07e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4121 K02115 - gmx:100797290 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4121 4 117412983 117414086 Mal4g4121 4 117412983 117414086 ECH