Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4118 ATGGATCAAAAGAAACAAGAGAAACCAGAGGAACAAAGCAATGTTAATGCAACACAAACACAAGCAAATGGTGAGAACCAAAATCAATCAAACCAAATAATGCCATTATCTCGCCCTGTATTTCGCACTGCAGGTGCTTCTGCCTTTTCATCCTACCCGAGCAGAGTTCAACTCCAAGAACTCTCTTATCGACAACAAAAACAACAAGAATTGCAGAAAAAACTTGCCACCTTTTGGGCAAATCAAATTCAAGAAATTGCGGAAACTGTTAATTTCAAAACTAATGGCTTGCCTTTAGCCAGGATTAGGAAGATCATGAAAGCAGAAGAAGGAGTGAGTATGATATCAGCAGATTCACCTATTCTGTTAGCTAAGGCATGTGAAATGTTTGTGATGGAGCTAACAATAAGGTCTTGGGCTAATACAGAGGTGAACCTAAGAAAAACAATTCAAAAGAGTGACATTGCATCTGCAGTCACAAGTAATGATGTGTTTGATTTCCTAGTTGATGTTGTCCCAAGAGAAAAAACAATTGAGCATGACATATTTATGGGAGTACCAAGAAGAGAAAGTGTCCCAATAAGGAATGTTCCTTATTATGTGCCTATGCCATTTCATGTGCCACCTCAGTATGCTGCAGGTCCATCATATGGTCCTCCACAAATGCTTTTGGGAAGACATCTTCTCAACCAACCTCATTTCCATGGGCAGCCACCACACCCTGTTGCAAATCAAATGTTTCCAAGCTCAAAACAAGAAAATGAGTCAGATGATTTGCCAAATTCAGAAGATTAA 795 0.3937 MDQKKQEKPEEQSNVNATQTQANGENQNQSNQIMPLSRPVFRTAGASAFSSYPSRVQLQELSYRQQKQQELQKKLATFWANQIQEIAETVNFKTNGLPLARIRKIMKAEEGVSMISADSPILLAKACEMFVMELTIRSWANTEVNLRKTIQKSDIASAVTSNDVFDFLVDVVPREKTIEHDIFMGVPRRESVPIRNVPYYVPMPFHVPPQYAAGPSYGPPQMLLGRHLLNQPHFHGQPPHPVANQMFPSSKQENESDDLPNSED* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4118 264 MobiDBLite consensus disorder prediction 230 264 - -
Mal4g4118 264 Gene3D Histone, subunit A 60 174 IPR009072 GO:0046982
Mal4g4118 264 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 255 - -
Mal4g4118 264 SUPERFAMILY Histone-fold 72 168 IPR009072 GO:0046982
Mal4g4118 264 MobiDBLite consensus disorder prediction 1 37 - -
Mal4g4118 264 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 255 - -
Mal4g4118 264 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 97 159 IPR003958 -
Mal4g4118 264 MobiDBLite consensus disorder prediction 12 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4118 Mal-Chr4 117323620 117324414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4118 77 232 CCAAT-HAP5 Transcription Factor Family AT1G54830 48.125 1.00e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal4g4118 CBFD_NFYB_HMF 5.5e-16 CL0012