Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4117 ATGCCATTATCTCGTCCTGTATTTCACAATGCAGGTGCTTCTGCCTTTTCATCCTACCCGAGCAGAGTTCAACTCGAAGAACTCTCTTATCGACAACAAAAGCAACAAGAACTGCAGAAAAAACTTGCAATATTTTGGGCAAATCAAATTCAAGAAATTGCGGAAACCGTTAATTTCAAAACTAATGTCTTGCCTTTAGCAAGGATTAGGAAGATCATGAAAGCAGAAGAAGGAGTAAGTATGATATCAGCTGATGCACCTATTTTGTTAGCTAAGGTATGTGAGATGTTTATAATGGAGCTAACAATAAGGTCTTGGGCTAATACAGAGGTGAACCTAAGAAAAACAATTCAAAAGACTGACATTACATCTGCAGTCTCAAGTAATGATGTGTTTGATTTCCTAGTTGATATTGTCCCAAGGGAAAAAACAATGGAGCATGACATATTTATGGGAGTACCAAGAAGAGAAAGTGTCCCAATAAGGAATGTTCCTTATTATGTGCCTATGCCATTTCATGTGCCACCTCAGTATGCTGCAGGTCCATCATATGGTCCTCCACAAATGCTTATGGGAAGACATCTTCTCAACCAACCTCATTTCAATGGGCAGCCACCACACCCTGTTGCAAATCAATTGTCTCCAAGCTCAAAACAAGAAAATGACCATTCTGCTGATTTTCCAAATTCTGAAGATTAA 699 0.3891 MPLSRPVFHNAGASAFSSYPSRVQLEELSYRQQKQQELQKKLAIFWANQIQEIAETVNFKTNVLPLARIRKIMKAEEGVSMISADAPILLAKVCEMFIMELTIRSWANTEVNLRKTIQKTDITSAVSSNDVFDFLVDIVPREKTMEHDIFMGVPRRESVPIRNVPYYVPMPFHVPPQYAAGPSYGPPQMLMGRHLLNQPHFNGQPPHPVANQLSPSSKQENDHSADFPNSED* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4117 232 Gene3D Histone, subunit A 27 141 IPR009072 GO:0046982
Mal4g4117 232 MobiDBLite consensus disorder prediction 204 223 - -
Mal4g4117 232 MobiDBLite consensus disorder prediction 196 232 - -
Mal4g4117 232 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED 27 171 - -
Mal4g4117 232 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 64 126 IPR003958 -
Mal4g4117 232 SUPERFAMILY Histone-fold 42 135 IPR009072 GO:0046982
Mal4g4117 232 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 27 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4117 Mal-Chr4 117301478 117302176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4117 45 206 CCAAT-HAP5 Transcription Factor Family AT1G54830 48.193 3.06e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal4g4117 CBFD_NFYB_HMF 2.7e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4117 K08066 - nnu:104612503 187.193