Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4100 ATGAGGTGTGGCTGTTTTGGAGTATCTAGAAAGAAGGAAAGAAAACCTTCTGATTATATTTCTGGTGAAATTGAAGGTTATCCTTTAGATAATATTAGGCATTTTTCTGATAAAGAATTGAGCTTGGCAACTGATAATTATCATTTAAGCAATAAGATAGGAAGGGGAGGTTTTGGAACTGTTTATCAGGGAACATTAAAAGATGGAAGAAAGATAGCAGTGAAGCCTCTTTCTGTTGGATCAAAGCAGGGAGTTCGTGAATTTTTGACTGAAATTAAAACCTTATCACATGTTAAACATTCAAACCTCGTTGAATTGGTTGGATTCTGCATTCAAGGACCTAATCGTACAGTAGTCTATGAGTATGTGGAAAATGGCAACCTTCATACTGCATTACTTGGCAAAAAGAGTTTAAGCATCAAACTGAAGTGGAGAGAAAGATCTGCGATTTGCGTCGGTACTGCAAAGGGTCTTGCATATCTTCATGAAGAGCTTACACAACATATTGTACATAGAGACATCAAAGCTAGCAATGTACTACTTGACAAAGACTTTAATCCCAAAATAGGTGATTTTGGAATGGCCAAATTATTTCCAGATGATATCACTCACATCAGCACAAGAATTGCCGGAACAACTGGTTACTTGGCACCGGAATATGCACTAGGTGGTCAATTAACTAAGAAGGCTGATGTATACAGCTTTGGAGTTCTTATACTTGAAATAATAAGTGGCAAAAGCAGCTCAAGAACAAACTGGGATGGATCACATAAATCCCTCTTAGAATGGGCATGGCAACTTCATGAAGAGGAGAAATGGTTGGAGCTAGTAGATCCAGAGATGGAAGAGTTTCCTGAGAAAGAGATAATCAAGTACATTAAGGTTGCTCTTTTCTGCACACAAGCTGCAGCAAGAAGAAGACCATTGATGACTCAGGTTGTGGACATGCTCTCTAAGGAAATTCAGCTCAATGATAAACAACTAACAGCACCAGGATTGTTCAATTATGATGCAGGAGAAACTTCTCAAAAGAAATCAAATCCTGAATCTTTAGTTTATCACACTAGTTCTACTCAGCCTAGTATTACTGAGGTGACTGCTAGGTGA 1107 0.3812 MRCGCFGVSRKKERKPSDYISGEIEGYPLDNIRHFSDKELSLATDNYHLSNKIGRGGFGTVYQGTLKDGRKIAVKPLSVGSKQGVREFLTEIKTLSHVKHSNLVELVGFCIQGPNRTVVYEYVENGNLHTALLGKKSLSIKLKWRERSAICVGTAKGLAYLHEELTQHIVHRDIKASNVLLDKDFNPKIGDFGMAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTKKADVYSFGVLILEIISGKSSSRTNWDGSHKSLLEWAWQLHEEEKWLELVDPEMEEFPEKEIIKYIKVALFCTQAAARRRPLMTQVVDMLSKEIQLNDKQLTAPGLFNYDAGETSQKKSNPESLVYHTSSTQPSITEVTAR* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4100 368 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Mal4g4100 368 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 360 - -
Mal4g4100 368 SMART serkin_6 47 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4100 368 SUPERFAMILY Protein kinase-like (PK-like) 24 317 IPR011009 -
Mal4g4100 368 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4100 368 PIRSF TyrPK_CSF1-R 36 150 - -
Mal4g4100 368 PIRSF TyrPK_CSF1-R 135 249 - -
Mal4g4100 368 PIRSF TyrPK_CSF1-R 281 366 - -
Mal4g4100 368 PANTHER - 1 360 - -
Mal4g4100 368 Gene3D Phosphorylase Kinase; domain 1 21 122 - -
Mal4g4100 368 CDD STKc_IRAK 53 319 - -
Mal4g4100 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Mal4g4100 368 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Mal4g4100 368 MobiDBLite consensus disorder prediction 339 368 - -
Mal4g4100 368 Pfam Protein tyrosine and serine/threonine kinase 48 317 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4100 Mal-Chr4 116957790 116959974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4100 11 332 Receptor kinase-like Gene Family AT1G56120 50.307 3.92e-106 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g4100 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4100 - - mtr:MTR_2g013210 722.62