Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4070 ATGGACAACAACCCTAGTTCATCAAGAATTGACAGAAAATTCATTGAAAGGAATAGAAGAAATCAAATGAAAGCTCTCTACCACAAGCTCAACTCACTTCTGCCTCATCAAACCTCTAAGGAGGCTATTTCTATGCCGGATCAGCTCGAGGAAGCAGCAAACTACATAAAGAAATTACAGATCAATTTGGAGAAAATGAAGGAAAAGAAAAAAATTCTACTAGGAATTCAAAGGCCAAATGTGAATGTGAATAGAAGCAAGAGCTTGGGATTAAAGTCTCCAAAAATTGAGATCCAACAAATTGGTTTAATTTTAGAGGTTGTTCTAATAACTGGATTGGATTCTCAGTTTTTGTTCAATGAAACCATTCGTGTTCTTCATGAAGAAGGAGTTGATATTGTTAATGCAAGTTATAAAGTCAATGAAGACTCTATTTTCCATTCAATACACTGTCAGGTAGGAGAATTTGGCAATGAAGCTGCAAGGATATCTGAGAGATTGAAGAAGTTTATGCATGTTTATTAG 525 0.3505 MDNNPSSSRIDRKFIERNRRNQMKALYHKLNSLLPHQTSKEAISMPDQLEEAANYIKKLQINLEKMKEKKKILLGIQRPNVNVNRSKSLGLKSPKIEIQQIGLILEVVLITGLDSQFLFNETIRVLHEEGVDIVNASYKVNEDSIFHSIHCQVGEFGNEAARISERLKKFMHVY* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4070 174 PANTHER TRANSCRIPTION FACTOR BHLH162 1 172 - -
Mal4g4070 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Mal4g4070 174 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 172 IPR015660 GO:0003700|GO:0006357
Mal4g4070 174 Gene3D - 2 86 IPR036638 GO:0046983
Mal4g4070 174 Pfam Helix-loop-helix DNA-binding domain 12 60 IPR011598 GO:0046983
Mal4g4070 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 74 IPR036638 GO:0046983
Mal4g4070 174 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4070 Mal-Chr4 116510869 116511842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4070 3 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 46.111 3.03e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g4070 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4070 - - gmx:100784418 247.284