Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4062 ATGAAGTTCAACGTTGCAAATCCCACCACTGGATGCCAGAAGAAACTCGAGATAGACGATGACACGAAGCTTCGTGCTTTTTGGGACAAGAGGATCTCGCAAGAGGTTTTGGGTGATGCATTGGGTGAAGAATTTAAAGGGTATGTGTTTAAAATAACTGGAGGATGTGACAAGCAAGGATTTCCAATGAAGCAGGGAGTGCTAACCCCTGGTCGTGTTCGTCTCTTGCTTCACCGAGGAACTCCTTGCTTCCGAGGATATGGAAGGCGCAATGGAGAGCGTAGGAGGAAGTCTGTTCGTGGTTGCATTGTCAGCCCAGACCTCTCTGTCCTGAACTTGGTTATTGTGAAGAAGGGTGAAAATGATTTGCCAGGTTTGACAGATGTTGAAAAGCCGAGAATGAGGGGTCCTAAGAGAGCTTCCAAGATCCGTAAGCTCTTCAATCTGTCCAAGGATGATGATGTCAGGAAGTATGTCAACACCTACCGTCGGAATTTCACAACCAAAGATGGGAAAAAGGTGAGCAAAGCCCCAAAGATACAGCGCCTGGTCACTCCCCTGACCCTTCAAAGAAAGAGGGCAAGAATTGCTGATAAGAAGAAAAGAATTGCCAAAGCAAAATCAGAGGCAGCAGAGTACCAAAAACTTCTTGCCTCCAGAATCAAGGAGCAGAGGGAACACCGCAGTGAGAGTTTGGCTAAGAAGAGATCAAGACTCTCCACTGCTAAGCAAGCTGTTGCAGCGTAG 747 0.4712 MKFNVANPTTGCQKKLEIDDDTKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRNFTTKDGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRIKEQREHRSESLAKKRSRLSTAKQAVAA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4062 248 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mal4g4062 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal4g4062 248 PIRSF RPS6e 1 248 IPR014401 GO:0003735|GO:0005840|GO:0006412
Mal4g4062 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 - -
Mal4g4062 248 Coils Coil 189 216 - -
Mal4g4062 248 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal4g4062 248 Gene3D - 133 234 - -
Mal4g4062 248 MobiDBLite consensus disorder prediction 220 248 - -
Mal4g4062 248 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal4g4062 248 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4062 Mal-Chr4 116363796 116366731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4062 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 72.727 8.08e-118 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4062 K02991 - gmx:100804076 427.557