Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4033 ATGGGTTTGGATTACTATGAGATTTTGGAGGTTGAAAAGAATGCTACAGATGAAGAGTTGAAGAAAGCATATAGAAAACTTGCCATGAAATGGCACCCTGATAAGAATCCCAACAATAAGAATGATGCTGAGACTAAATTCAAACTCATATCTGAAGCATATGAGGTTCTAAGTGATCCACAGAAGAGAGCAATTTACGATCAGTATGGAGAAAGCAGCCTTAAAAATGGAATGCCACCAACGGGTGATAGTGCAGCTCCATACTTCCAAACTCAGGATGGCAGAAGGTTTAGGTTCAATCCCAGAAGTGCAGATGGCATATTTGCAGAAGTTTTTGGCTTTTCAAGCCCTTATGGAGGAATGGGAATGAGGGGTGGCGGCTGCAGAGGCATGGGCATGAGGGGTCAGTCATGGGTGTCGAGGTCTTTTGGCGATATTTTTGGCAAAGACGTATTTACAGAAAGCAGACACACGACTCAACCTCCAAGACGCAAGGCACCTCCTATTGAAAATAAATTACCTTGCAGCCTTGAAGAGCTTTATAAGGGTACCACCAAAAAAATGAAGATCTCAAGGGAAATTACATATGCAAGCGGCAAAATTGTACCTGTGGAGGAAATACTAACAATTGAAGTCCAACCAGGCTGGAAAAAGGGAACAAAAATCACTTTCCCAGAGAAAGGAAATGAGCAACCAAATGTTATTGCTGCAGATATCATATTCATCATTGATGAGAAACCTCACAATGTATTTTCAAGACAAGGTAATGATTTGGTTCTGACGCAAAAGATATTACTTGCAGAAGGAGAAGCTCTAAGCCGAAGCTACACCTTCCAACTTACTACTTTGGATGGAAGGGATCTGACCATTGCCATTGACAACGGAATTGATCCAACCTATGAAGAAGTGGTCGCCGGCGAAGGGATGCCAATTTCCAAAAATCCTTCACAGAGGGGTAATCTTAGGATCAAATTCGACATCACATTCCCAAGCATGGTTGATGCTGAAACAGAAAGCCAGAACTAA 1026 0.4201 MGLDYYEILEVEKNATDEELKKAYRKLAMKWHPDKNPNNKNDAETKFKLISEAYEVLSDPQKRAIYDQYGESSLKNGMPPTGDSAAPYFQTQDGRRFRFNPRSADGIFAEVFGFSSPYGGMGMRGGGCRGMGMRGQSWVSRSFGDIFGKDVFTESRHTTQPPRRKAPPIENKLPCSLEELYKGTTKKMKISREITYASGKIVPVEEILTIEVQPGWKKGTKITFPEKGNEQPNVIAADIIFIIDEKPHNVFSRQGNDLVLTQKILLAEGEALSRSYTFQLTTLDGRDLTIAIDNGIDPTYEEVVAGEGMPISKNPSQRGNLRIKFDITFPSMVDAETESQN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4033 341 Gene3D - 168 246 - -
Mal4g4033 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 163 259 IPR008971 GO:0006457|GO:0051082
Mal4g4033 341 CDD DnaJ_C 167 331 - -
Mal4g4033 341 CDD DnaJ 4 59 IPR001623 -
Mal4g4033 341 Pfam DnaJ domain 4 67 IPR001623 -
Mal4g4033 341 Pfam DnaJ C terminal domain 169 330 IPR002939 -
Mal4g4033 341 SMART dnaj_3 3 62 IPR001623 -
Mal4g4033 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Mal4g4033 341 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 337 - -
Mal4g4033 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mal4g4033 341 Gene3D DnaJ domain 3 124 IPR036869 -
Mal4g4033 341 SUPERFAMILY Chaperone J-domain 4 73 IPR036869 -
Mal4g4033 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 336 IPR008971 GO:0006457|GO:0051082
Mal4g4033 341 Gene3D - 248 331 - -
Mal4g4033 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mal4g4033 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mal4g4033 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mal4g4033 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
Mal4g4033 341 Coils Coil 6 26 - -
Mal4g4033 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4033 Mal-Chr4 115988392 115990562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4033 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 2.32e-09 56.6