Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4028 ATGTTTCCCCTTCTCTTCTTCCTCCTCCTCCTTCAACCACCAACCATTTTCTCTCTCAACCAAGAAGGTCTCTACCTACACCAATTCAAACTCTCCGTAGACGATCCATCTTCCTCCTTATCCACATGGAACAACCACGACCAAAACCCATGTTCTTGGTCAGGCATAACCTGCGACCCAACAAACACAACCGTAACAAAAATTAACCTCTCCAACTTCAACCTAGCTGGTCCATTACAAACCTCAACCCTCTGTCGTCTCACAAACTTAACCACCCTCATCCTAACCAACAACTCCATCAACCAAACACTCCCTTTAGATATTTCTCTTTGCACCTCCCTTACTCATTTAGACCTCTCTAACAATCTTCTCATTGGTACACTCCCCCATACACTTCCACACCTCCCTAACCTCCGTTATCTCGACTTAACAGCCAACAACTTCTCAGGCTCAATCCCTACCTCCTTCGGAACATTCCAGAAACTCGAAGTCATTTCACTAGTTTTCAATCTTCTAGAATCTTCTATTCCACCTTCACTTGGAAACATTACCTCTTTGAAAACACTTAATCTTTCTTTTAACCCTTTTCTACCTTCTCCGATCCCGCCGGAGATTGGAAACTTAACCAACCTCGAAGTTCTTTGGCTTAGTTCATGTAATCTTGTTGGTGTTATTCCTGATTCATTTCGAAAATTGAAGAAACTCAGTGTTTTTGATCTTTCTATGAATAGTCTTGAAGGTTCTATTTCGAGTTCGATTACTGAAATGAAGAGCTTGAAGCAGATTGAGTTTTATAATAACTCGTTTTCCGGTGAGTTACCGGTGGGAATGTCAAATCTTACTTCATTGAGGTTGATTGATGTTTCTATGAACCGTATTGGTGGTGAAATTCCTGATGAGTTGTGTAGGTTACCTCTTGAGAGTCTTAATTTGTTTGAGAATAGGTTTACCGGTGAGTTGCCGGCGAGTATAGCTGATTCGCCCAATCTTTATGAGTTAAAGGTTTTTGCAAATTTGCTCTCCGGTGAGTTACCGGAGAATCTTGGGAAGAATGGTCCGTTGATTTATATTGATGTTTCCAATAATAAATTCTCTGGTAGGATTCCGGGGAGTTTGTGTGATCGTGGCGCGTTGGAGGAGTTATTGATGATACATAATGAATTTTCTGGGGAGATTCCGGGGAGTTTTGGTGACTGTCGGACATTGACGCGTGTTAGGTTGGGTTTTAATAAGTTGTCTGGTGAAGTTCCGGCGGGTTTTTGGGGTCTGCCGCATGTGTATCTTCTTGAACTTGTTGATAACTTGTTTTCTGGTTCAATTGGTAAGACTATTGGTGGAGCTGGGAATTTGTCTCAGTTGACTTTGTCCAATAATAATTTCTCTGGTGTGATTCCTGAAGAGATTGGATTGTTGGAAAATCTTCAGGAATTTTCTGGTGGTAATAACCAGTTCAACTCTTCGTTGCCTGAGAGTATTGTGAATCTCCAGCAGCTTGGGATTCTTGATCTTCACAATAATAAGCTTTCTGGGGAGATTCCAAAAGGGATTCAATCTCTTAAGAAACTCAATGAGTTGAATTTGGCTGATAATGAGATTGGTGGGAAAATTCCTGAAGAAATTGGGAGTATGTCTGTGCTTAACTTTCTTGATCTTTCTAATAATCGGTTTTCCGGAAATGTTCCAGTGAGTTTGCAGAATTTGAAGCTCAATCAGCTGAATTTGTCTTACAATGGGCTTTCTGGAGAGATTCCTCCTCTTATGGCTAAGGATATGTATAGGGATAGTTTTATTGGTAATCCTGGTTTGTGTGGAGATTTGAAAGGTTTGTGTGATGTCAAAGGGGAGGGTAAAAGTGTACGTTTTGTTTGGTTGCTTAGAACTATTTTCATAGTTGCAGCTTTGGTTTTGGTCTTTGGTTTGATTTGGTTCTACTTTAAGTACATGAATATCAAGAAAGCTAGATCTATTGATAAAACCAAATGGACATTGATGTCATTTCATAAACTGGGTTTTGGTGAAGATGAGGTCTTGAATTGCCTTGATGAAGATAATGTCATAGGAAGTGGATCGTCCGGGAAAGTCTACAAGGTTGTGCTTCGCAACGGGGAAGCTGTCGCCGTGAAGAAGATATGGGGAGGGGTTAGAATGGAAACAGAAAGTGGCGATATTGAAAAGAATCGATTTCAAGACGATGCTTTTGATGCAGAGGTTGAAACTTTGGGTAAGATTAGGCACAAGAACATTGTCAAGCTATGGTGTTGCTGCACCACAAGGGATTGCAAGCTATTGGTTTATGAGTATATGCCAAATGGTAGTCTTGGTGATTTGCTGCATAGCAATAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAGCTCTTGCTGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCTCCTATCGTTCATAGAGATGTGAAGTCTAACAACATCTTGTTGGATGAGGACTTTAGCGCAAGGGTCGCAGATTTTGGGGTAGCTAAGGTGGTCGAATCCAATGGAAAAGGAACTAAATCCATGTCTGTCATAGCTGGTTCTTGTGGGTATATTGCACCAGAATATGCATATACACTTAGAGTGAATGAGAAGAGCGATATCTATAGTTTTGGTGTTGTTATCCTTGAGTTAGTCACCGGAAGGAAGCCTGTAGATCCGGAGTTTGGGGAAAAAGACTTGGTTATGTGGGCATGCAACACATTGGATCAGAAAGGTGTTGATGATGTGCTTGACTCACGGCTTGATTCATTTTACAAAGAAGAAATTTGCAAGGTCCTCAACATTGGCCTAATGTGCACTAGTCCTCTTCCAATCAACCGGCCCGCTATGAGAAGAGTGGTGAAGATGTTACAAGAAGTAGGCCCAGAGAGCCAAACAAAGTCTTCCCAGAAAGATGGAAAGTTGTCCCCATATTACTATGATGATGGATCAGATCATGGAAGTGTTGCTTAA 2982 0.4131 MFPLLFFLLLLQPPTIFSLNQEGLYLHQFKLSVDDPSSSLSTWNNHDQNPCSWSGITCDPTNTTVTKINLSNFNLAGPLQTSTLCRLTNLTTLILTNNSINQTLPLDISLCTSLTHLDLSNNLLIGTLPHTLPHLPNLRYLDLTANNFSGSIPTSFGTFQKLEVISLVFNLLESSIPPSLGNITSLKTLNLSFNPFLPSPIPPEIGNLTNLEVLWLSSCNLVGVIPDSFRKLKKLSVFDLSMNSLEGSISSSITEMKSLKQIEFYNNSFSGELPVGMSNLTSLRLIDVSMNRIGGEIPDELCRLPLESLNLFENRFTGELPASIADSPNLYELKVFANLLSGELPENLGKNGPLIYIDVSNNKFSGRIPGSLCDRGALEELLMIHNEFSGEIPGSFGDCRTLTRVRLGFNKLSGEVPAGFWGLPHVYLLELVDNLFSGSIGKTIGGAGNLSQLTLSNNNFSGVIPEEIGLLENLQEFSGGNNQFNSSLPESIVNLQQLGILDLHNNKLSGEIPKGIQSLKKLNELNLADNEIGGKIPEEIGSMSVLNFLDLSNNRFSGNVPVSLQNLKLNQLNLSYNGLSGEIPPLMAKDMYRDSFIGNPGLCGDLKGLCDVKGEGKSVRFVWLLRTIFIVAALVLVFGLIWFYFKYMNIKKARSIDKTKWTLMSFHKLGFGEDEVLNCLDEDNVIGSGSSGKVYKVVLRNGEAVAVKKIWGGVRMETESGDIEKNRFQDDAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSNKGGLLDWPTRYKIALAAAEGLSYLHHDCVPPIVHRDVKSNNILLDEDFSARVADFGVAKVVESNGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRKPVDPEFGEKDLVMWACNTLDQKGVDDVLDSRLDSFYKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGPESQTKSSQKDGKLSPYYYDDGSDHGSVA* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4028 993 MobiDBLite consensus disorder prediction 962 993 - -
Mal4g4028 993 Pfam Leucine Rich Repeat 113 135 IPR001611 GO:0005515
Mal4g4028 993 Pfam Leucine Rich Repeat 210 232 IPR001611 GO:0005515
Mal4g4028 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Mal4g4028 993 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Mal4g4028 993 Gene3D Transferase(Phosphotransferase) domain 1 768 986 - -
Mal4g4028 993 SMART serkin_6 680 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4028 993 SUPERFAMILY RNI-like 67 389 - -
Mal4g4028 993 Gene3D Ribonuclease Inhibitor 19 178 IPR032675 -
Mal4g4028 993 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Mal4g4028 993 Gene3D Ribonuclease Inhibitor 180 319 IPR032675 -
Mal4g4028 993 SUPERFAMILY Protein kinase-like (PK-like) 676 960 IPR011009 -
Mal4g4028 993 Pfam Protein kinase domain 682 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4028 993 SMART LRR_typ_2 87 111 IPR003591 -
Mal4g4028 993 SMART LRR_typ_2 519 543 IPR003591 -
Mal4g4028 993 SMART LRR_typ_2 495 518 IPR003591 -
Mal4g4028 993 SMART LRR_typ_2 183 207 IPR003591 -
Mal4g4028 993 SMART LRR_typ_2 208 231 IPR003591 -
Mal4g4028 993 SMART LRR_typ_2 135 161 IPR003591 -
Mal4g4028 993 SMART LRR_typ_2 280 304 IPR003591 -
Mal4g4028 993 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 973 - -
Mal4g4028 993 PANTHER LRR RECEPTOR-LIKE KINASE 8 973 - -
Mal4g4028 993 SUPERFAMILY L domain-like 338 603 - -
Mal4g4028 993 Gene3D Phosphorylase Kinase; domain 1 665 767 - -
Mal4g4028 993 ProSiteProfiles Protein kinase domain profile. 680 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g4028 993 Gene3D Ribonuclease Inhibitor 327 612 IPR032675 -
Mal4g4028 993 Pfam Leucine rich repeat 136 195 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4028 Mal-Chr4 115943814 115947227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4028 14 993 Receptor kinase-like Gene Family AT1G28440 66.667 0.0 1352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal4g4028 Pkinase 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4028 - - gmx:100776936 1518.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4028 4 115943814 115947227 Mal4g4028 4 115943814 115947227 ECH
Mal4g4028 4 115943814 115947227 Mal7g3500 7 100107494 100110891 ECH