Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4025 ATGGCATGGTGCAATGACTCTGATCATGCGGAGAGGGGAAATAACAACAACTCTGATGTCACTGATCACAGAAAGCTCAATGAAGGAATTGATCAAAATCAAAGCATAGAATGCCCCTCATGCGGCCATAATATTCAAGTAAAAAATCAGGGTGGAGTTCATGATTTACCGGGGTTACCAGCTGGAGTGAAATTTGACCCAAATGACATAGAAATTCTAGAGCATTTAGAGGCAAAAGTTATGTCTGATGTGTGCAAGCTTCATCCACTAATTGATGAGTTCATACCAACACTTGAAGGGGAGAATGGAATTTGTTATACACACCCAGAAAAACTACCAGGAGTAAGCAAAGATGGACAAATCCGCCACTTTTTTCATAGGCCTTCCAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAAGTGAAACAAGATGGCACAAAACAGGGAAAACTAGAGCAGTTTTTGCCAGTGGTGTTGTGAAGGGATTTAAAAAGATACTAGTACTCTACACCAACTATGGAAGACAAGGAAAACCAGAGAAGACTAATTGGGTGATGCATCAATACCATATTGGAAACACTGAAGAAGAGAGAGATGGAGAATTAGTTGCTTCAAAGGTCTTCTACCAGACACAGCCTAGACAACATGCTAATACCATTAATAATGTAAGAGAATCATATGAAAAGATAGTTAACAAAGGAAGTGGCCATGGTAATGCCAACACAACTCCCAATAATTTGGCTCTTGTGGAATGCTACAATGCTTCTTATACAAATTATGACCATGTCCATGTTGGTCAAAGTAGGGAGAGGCCTCTACAAGTTATTCCAAACTTGGTTGTGCAAGGTGATGGATCTGTTATTCACTTATCAATGGATCATGCAAACAAAGTAAGAGTACTGGAGAGAAAGTAA 939 0.3951 MAWCNDSDHAERGNNNNSDVTDHRKLNEGIDQNQSIECPSCGHNIQVKNQGGVHDLPGLPAGVKFDPNDIEILEHLEAKVMSDVCKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRAVFASGVVKGFKKILVLYTNYGRQGKPEKTNWVMHQYHIGNTEEERDGELVASKVFYQTQPRQHANTINNVRESYEKIVNKGSGHGNANTTPNNLALVECYNASYTNYDHVHVGQSRERPLQVIPNLVVQGDGSVIHLSMDHANKVRVLERK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4025 312 ProSiteProfiles NAC domain profile. 59 218 IPR003441 GO:0003677|GO:0006355
Mal4g4025 312 Gene3D NAC domain 69 222 IPR036093 GO:0003677|GO:0006355
Mal4g4025 312 Pfam No apical meristem (NAM) protein 60 199 IPR003441 GO:0003677|GO:0006355
Mal4g4025 312 SUPERFAMILY NAC domain 53 218 IPR036093 GO:0003677|GO:0006355
Mal4g4025 312 MobiDBLite consensus disorder prediction 1 23 - -
Mal4g4025 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 294 IPR044799 GO:0003700
Mal4g4025 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4025 Mal-Chr4 115918597 115921544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4025 1 300 NAC Transcription Factor Family AT1G28470 58.025 3.41e-114 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g4025 NAM 4.1e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4025 4 115918597 115921544 Mal4g4025 4 115918597 115921544 ECH
Mal4g4025 4 115918597 115921544 Mal7g3498 7 100088829 100091235 ECH