Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4021 ATGGGGTTAATCGATCTCAACACTACAGAAGATGATGAAACTCCATATTCAGCTATTTCTTCTTCATCTTCTTCTTCTCACTCTGGTATAAGTACTTCTGCTTCAGCAGCTATGGTTGTTCCTCCTCCTACTCTTCAAGGTTCTGTTTGTTTGGAGCTATGGCATGCTTGTGCTGGTCCTTTGATCTCTTTACCAAAGAAAGGAAGCATTGTTGTGTATGTTCCACAAGGACACTTTGAACAAGCTCATGATTTTCCTGTTTCTGCTTGTAATATTCCACCTCATGTTTTCTGTCGTGTTCTTGATGTTAAGCTACATGCTGAGGAAGGGAGTGATGAAGTGTATTGCCAAGTCTTGTTGGTTCCTGAAAATCAGCAAGTGGAGCAAAATGTTCGGGAAGGGGTAATCGATGCTGATGCAGAAGAGGAGGATACTGAAGCTATTGTGAAGTCAACAACACCCCATATGTTCTGCAAGACTCTCACAGCTTCTGACACTAGCACTCATGGAGGATTCTCCGTGCCTCGTCGAGCTGCTGAAGACTGCTTTCCTCCCCTGGATTACAGCCAGCAGAGACCTTCACAAGAGCTTGTAGCGAAGGATCTGCATGGCTCGGAGTGGAGGTTCCGACATATATACAGGGGGCAGCCAAGGAGGCATTTGCTCACAACTGGGTGGAGTGCATTTGTGAATAAGAAGAAGCTTGTGTCCGGTGATGCTGTGTTGTTTCTTAGGGGTGAGGATGGAGAACTGAGACTAGGGATTCGAAGGGCGGTGCAGTTGAAAAATTCTGGTTCCTTTGGAGCTCCCTCTGGTATGCAACTGGATCCTGGCTCTCTCATGGATGTTGTGAATGCTTTATCTAAAAGATCTGCATTCAGTGTTTGCTATAATCCAAGGGTGAGTTCTTCAGAATTCATCATACCTGTCAACAAATTCTTGAAGAGCCTTGATAGTTCTTATTCTGCTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTGCAGAGCGAAGATTCACTGGATTAATTGCTGGAATAAGTGATGTGGATCCTGTTAGATGGCCAGGATCAAAATGGAAATGCCTATTGGTAAGGTGGGATGACATAGAAGCATCAAGACATAATAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCCAATTCCAGTAACCTGATGGCAGCAAGTTTGAAGAGGACCAGGATTGGATTCACTTCATCAAAGCTAGAATTTCCAGTTCCCAATGGGATTGGAGCGTCAGACTTTGGGGAATCGTTAAGATTCCGAAAGGTCTTGCAAGGTCAAGAAATTATGGGCATCAATACTCCCTATGACAGTATTAATGCTCAGAGTCCCCGGTTGTATGAGCTAGGGAGGTGCTATCCCGGTTCAAACTGTTCTGGGATTGCTGCAACAGGAAATATCAGAATGCAGCCAGCGACTTCTGATTTTCCCTGTAATGGCATAGGCTTTGGTGAATCTTTTAGATTCCAAAAGGTCTTGCAAGGTCAAGAAATTCTTCCGTGCCCACCCTACGGACGAGCCTCGTTTGACGAGGCCCGTGGAAATGGTTGTGTTGGACGTTATGATGGTTATCCAATGCTCGGCTCCAGAAATGGATGGCCTGCACAGATGCACGACGCTGCTTCACATTTGCATGCATCTGTTACATCTGGACAAGTTTCGTCTCCATCATCCGTGTTAATGTTTCAGCAGGCTGTTAATCCAATTTCAAACTCTCGTTATGATAATATTAATCTCAATCAGGCTTCATACATATCTGAAGCGAAAAGTGGAATGTTTGCGCCTTCTCTATCTGACAATCCTGTTTTATCTAGTGGACTTGCTCAGGAAGGCACAGATTCTTTTGGTGTGCATAATTTTCATAACAATAATCTGTTGGATAGTTCAAGGTCTCGTGATTCAGTGTCAGCGATGAGAGGCAATCAAGATATGGTTTCTTCTTGTAAAACTGGCTGCAGACTCTTTGGTTTTTCATTAACCGATGACACTCACATTGGCGGCGGTTGA 2043 0.4444 MGLIDLNTTEDDETPYSAISSSSSSSHSGISTSASAAMVVPPPTLQGSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAHDFPVSACNIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPENQQVEQNVREGVIDADAEEEDTEAIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGSEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKNSGSFGAPSGMQLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDSSYSAGMRFRMRFETEDAAERRFTGLIAGISDVDPVRWPGSKWKCLLVRWDDIEASRHNRVSPWEIEPSGSASNSSNLMAASLKRTRIGFTSSKLEFPVPNGIGASDFGESLRFRKVLQGQEIMGINTPYDSINAQSPRLYELGRCYPGSNCSGIAATGNIRMQPATSDFPCNGIGFGESFRFQKVLQGQEILPCPPYGRASFDEARGNGCVGRYDGYPMLGSRNGWPAQMHDAASHLHASVTSGQVSSPSSVLMFQQAVNPISNSRYDNINLNQASYISEAKSGMFAPSLSDNPVLSSGLAQEGTDSFGVHNFHNNNLLDSSRSRDSVSAMRGNQDMVSSCKTGCRLFGFSLTDDTHIGGG* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4021 680 Gene3D - 155 259 IPR015300 -
Mal4g4021 680 PANTHER AUXIN RESPONSE FACTOR 40 677 - -
Mal4g4021 680 SUPERFAMILY DNA-binding pseudobarrel domain 150 264 IPR015300 -
Mal4g4021 680 CDD B3_DNA 155 257 IPR003340 GO:0003677
Mal4g4021 680 Pfam Auxin response factor 284 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal4g4021 680 MobiDBLite consensus disorder prediction 10 27 - -
Mal4g4021 680 ProSiteProfiles B3 DNA-binding domain profile. 157 259 IPR003340 GO:0003677
Mal4g4021 680 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 40 677 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal4g4021 680 SMART B3_2 157 259 IPR003340 GO:0003677
Mal4g4021 680 MobiDBLite consensus disorder prediction 1 27 - -
Mal4g4021 680 Gene3D - 320 394 - -
Mal4g4021 680 Pfam B3 DNA binding domain 157 258 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4021 Mal-Chr4 115875334 115879328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4021 156 513 B3 DNA Binding Superfamily AT2G33860 60.221 3.64e-145 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal4g4021 B3 1.1e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4021 K14486 - gmx:100789906 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4021 4 115875334 115879328 Mal4g4021 4 115875334 115879328 ECH