Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3996 ATGGCACTTTCTATGCATAAAGAAATGGATGCTGGTAAATATGTGAGGTACACTCCTGAACAAGTTGAAGCTTTGGAGAGAGTTTATTCAGAATGTCCTAAGCCTAGTTCTTTGAGAAGACAACAACTCATAAGAGAGTGTCCTATCCTTTCCAACATTGAACCTAAACAGATCAAGGTTTGGTTTCAAAACCGAAGGTGCCGTGAGAAGCAAAGAAAGGAAGCTTCACGTTTACAGACAGTGAATAGGAAGTTGTCTGCAATGAACAAGCTCTTAATGGAAGAGAATGACCGTCTGCAGAAGCAAGTTTCTCATTTGGTTTATGAGAATGGATACATGAAGCAACAGATTCACACTGTGAGTGCTTCTGCTGCAACTACCACAGATAATAGCTGTGATTCTGTGGTAATGAGTGGTCAAAACCAACAGCAAAACCCAACTCAGCGTCCTCAAAGGGATGCAAACAACCCAGCTGGTCTTCTCGCCGTGGCTGAGGAGACCCTGGCAGAGTTCCTTTCTAAGGCTACCGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGAATCTATTGGCATCGTTGCTGTTTCCCGCAACTCTAGTGGGATAGCGGCGCGAGCCTGCGGCCTTGTGAGTCTAGAGCCCACTAAGGTTGCCGAGATTCTTAAAGATAGATTGTCATGGTATCGTGACTGCCGATGCGTTGATGTATTGAGTATTGTCCCCACTGGTGGTGGGGGTACAATAGAGCTTATGTACATGCAGACGTATGCGCCTACAACATTGGCTGCAGCACGAGACTTTTGGACACTGAGATACACTACGAGTTTGGAAGATGGAAGTCTTGTGATATGTGAAAGATCGTTGAATGCTTCTACTGGTGGCCCTACAGGGCCTTCTCCGACTAATTTTGTGAGAGCTGAAATGCTTCCTAGTGGTTTTCTTATTAGACCATGCGAGGGTGGTGGATCCATAATTCATATTGTTGATCATGTTGATTTAGATGTTTGGAGTGTCCCTGAAGTTCTGAGGCCCCTTTATGAATCGTCAAAAATCTTGGCTCAAAAATTAACTATTGCAGCATTGCAACACATAAAACAGATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGCGGCCGTCAACCAGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGGTTCAATGATGCTGTGAATGGATTTGTTGATGACGGTTGGTCGTTGCTGGGAAATGATGGTGTTGAAGATGTGACAATCGCTGTGAACTCGTCTCCGAACAAGTTTTTGGGGTCAAATTATTCATCAATGTTTCCAACATTTGGAGGCGGTGTCTTGTGTGCCAAGGCATCAATGCTGCTGCAGAACGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAATGGGCTGATTATGGTGTTGATGCATACTCTGCTACTTGTCTCAAGTCTAGCCCCTACGCGGTTCCGTGTGCCAGACCTGGTGGCTTCCCTAGTAGCCAGGTCATTTTACCTCTGGCTCCAACGATCGAGCACGAGGAGTTCTTGGAGGTAGTTCGTATAGAGGGACATGCATTCTCCCCAGAAGATGTTGCGTTGGCACGTGATATGTATCTTTTGCAGCTTTGCAGTGGAATTGATGAAAATTCAGTTGGAGCATGTGCTCAACTTGTGTTTGCGCCTATAGATGAATCCTTTGCAGATGATGCCCTCTTGTTGCCTTCTGGTTTTCGAGTTATTCCCTTGGACCCTAAATCAGACGGTCCAGCCGCGTCAAGAACATTGGATTTGGCATCAACACTCGAAGGATCTAGTAATGCTCGTCCATCGGGTGAAAGTGGTGGTTCAAATGGATACAACCTTAGGTCGGTGCTTACCATTGCATTCCAATTTACCTTTGAGAATCATTTGCGCGACAATGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGTGTTGTGGCATCAGTTCAGAGAGTTGCCATGGCAATTGCTCCCTCTCGGCCAGGTACTCAGCTGGGGCCAAAGTCTCTTCCTGGTTCGCCAGAAGCTCATGCTTTAGCGCGATGGATCTGTAGAAGCTACAGGATGCACACTGGTGCCGAGCTCTTTAGAGTCGAGTCCGCAGCGAGCGATGCAATATTGAAACAACTTTGGCACCATTCTGATGCAATTATGTGCTGTTCTGTAAAAACAAATGCATCTCCAATATTCACCTTTGCAAATCAGGCTGGACTAGACATGCTTGAAACTACTCTAGTTGCTCTTCAAGATATTATGCTTGATAAAGTTCTTGATGAAGCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCTAAGATTATGCAACAGGGTTATGCATATCTGCCAGCAGGGATATGTGTATCAAGTATGAATAGGCCAGTGTCTTATGAGCAAGCCATTGCATGGAAAGTTCTTAATGATGACGATGCCAATCACTGCTTAGCTTTCATGTTCATCAACTGGTCCTTTGTCTGA 2526 0.4565 MALSMHKEMDAGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTVSASAATTTDNSCDSVVMSGQNQQQNPTQRPQRDANNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPESIGIVAVSRNSSGIAARACGLVSLEPTKVAEILKDRLSWYRDCRCVDVLSIVPTGGGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNASTGGPTGPSPTNFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIKQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSATCLKSSPYAVPCARPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGIDENSVGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPAASRTLDLASTLEGSSNARPSGESGGSNGYNLRSVLTIAFQFTFENHLRDNVAAMARQYVRSVVASVQRVAMAIAPSRPGTQLGPKSLPGSPEAHALARWICRSYRMHTGAELFRVESAASDAILKQLWHHSDAIMCCSVKTNASPIFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDANHCLAFMFINWSFV* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3996 841 SUPERFAMILY Bet v1-like 163 374 - -
Mal4g3996 841 SUPERFAMILY Bet v1-like 410 596 - -
Mal4g3996 841 Pfam Homeodomain 13 71 IPR001356 GO:0003677
Mal4g3996 841 MobiDBLite consensus disorder prediction 130 155 - -
Mal4g3996 841 Gene3D - 196 378 IPR023393 -
Mal4g3996 841 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Mal4g3996 841 Coils Coil 78 102 - -
Mal4g3996 841 Gene3D - 6 79 - -
Mal4g3996 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 841 - -
Mal4g3996 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 841 IPR044830 GO:0003700
Mal4g3996 841 CDD bZIP 65 104 - -
Mal4g3996 841 Pfam MEKHLA domain 696 840 IPR013978 -
Mal4g3996 841 SUPERFAMILY Homeodomain-like 13 75 IPR009057 -
Mal4g3996 841 Pfam START domain 163 371 IPR002913 GO:0008289
Mal4g3996 841 SMART HOX_1 10 76 IPR001356 GO:0003677
Mal4g3996 841 CDD homeodomain 13 73 IPR001356 GO:0003677
Mal4g3996 841 SMART START_1 162 372 IPR002913 GO:0008289
Mal4g3996 841 MobiDBLite consensus disorder prediction 130 154 - -
Mal4g3996 841 ProSiteProfiles 'Homeobox' domain profile. 8 72 IPR001356 GO:0003677
Mal4g3996 841 CDD START_ArGLABRA2_like 157 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3996 Mal-Chr4 115206117 115211320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3996 7 841 Homeobox Transcription Factor Family AT2G34710 78.835 0.0 1373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal4g3996 START 7.1e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3996 K09338 - gmx:100779499 1516.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3996 4 115206117 115211320 Mal4g3996 4 115206117 115211320 ECH