Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3987 ATGTCAGTGAATCATCTTCGAATGGATCTTGGACGGCCCGCGTCAGGTAGAAGAAGATTGAAAGATTTATTGCTTCAGAAGGATAATCGCGTTTGTTCTGATTGTAATGCTCCAGATCCTAAATGGGCGTCTGCCAACATTGGGGTGTTTATATGCTTAAAATGTTGTGGTGTGCACAGAAGCCTTGGTACTCATATATCAAAGGTTTTGTCTGTGACATTGGATGAATGGTCAGATGATGAAGTAGATGCAATGATAGAAGTTGGGGGGAATGCTTCCGCTAATTCAATTTATGAGGCTTATATTCCTGAAGGATATACAAAACCCGGACCAGATGCAAGTCATGAGCAGCGTGCAAAGTTTATACGGTCAAAGTATGAGTTGCAAGAATTTTTGAAGCCTAGTTTGCGCATTGTATCTGGAAAAAGCAATCTATCAAGTTCTTCCAATAGTTATATGGATAGTTTTAAAAGTGCTAGTTCACAGAGAATGGAAGGTATGGTAGAATTCATTGGAATGTTGAAGGTGAAAGTGATTAAAGGCACAAATTTAGCCGTCCGGGATATAAAGTCAAGTGACCCATATGTTGTTTTGAACCTCGGCACACAGACTATGCAGACGACTGTAGTGAAGAGTAATTTGAATCCAGTCTGGAATGAGGAACTTATGCTGTCTGTTCCCGAGCATTATGGACAGCTGAAATTGAAAGTATTTGATCATGACACTTTTTCTGCTGATGATATAATGGGAGAAGCGGACATTGATCTTCAGTCACTGATAACATCTGCCATGGCATTTGGAGATGCTGGAATGTTTGGCGATATGCAGATCGGAAAATGGTTAAAATCTGACGACAATGCACTTATCGAGGATAGTGCAGTCAAAATTACTGATGGTACGGTTAAACAAGTGATGTCCCTCAAGCTCCAGAATGTTGAATCTGGAGAAATAGAATTAGAACTCGAATGGATCCCTCTTGATCAATAG 987 0.4022 MSVNHLRMDLGRPASGRRRLKDLLLQKDNRVCSDCNAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDEWSDDEVDAMIEVGGNASANSIYEAYIPEGYTKPGPDASHEQRAKFIRSKYELQEFLKPSLRIVSGKSNLSSSSNSYMDSFKSASSQRMEGMVEFIGMLKVKVIKGTNLAVRDIKSSDPYVVLNLGTQTMQTTVVKSNLNPVWNEELMLSVPEHYGQLKLKVFDHDTFSADDIMGEADIDLQSLITSAMAFGDAGMFGDMQIGKWLKSDDNALIEDSAVKITDGTVKQVMSLKLQNVESGEIELELEWIPLDQ* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3987 328 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 131 IPR001164 GO:0005096
Mal4g3987 328 CDD ArfGap 20 126 - -
Mal4g3987 328 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 10 328 - -
Mal4g3987 328 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 10 328 IPR044518 GO:0005096|GO:0005543
Mal4g3987 328 SMART arf_gap_3 17 139 IPR001164 GO:0005096
Mal4g3987 328 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 170 326 IPR035892 -
Mal4g3987 328 SUPERFAMILY ArfGap/RecO-like zinc finger 17 134 IPR037278 -
Mal4g3987 328 Gene3D C2 domain 170 328 IPR035892 -
Mal4g3987 328 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Mal4g3987 328 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Mal4g3987 328 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Mal4g3987 328 SMART C2_3c 173 268 IPR000008 -
Mal4g3987 328 Pfam Putative GTPase activating protein for Arf 18 133 IPR001164 GO:0005096
Mal4g3987 328 ProSiteProfiles C2 domain profile. 154 269 IPR000008 -
Mal4g3987 328 Pfam C2 domain 173 262 IPR000008 -
Mal4g3987 328 CDD C2_ArfGAP 171 315 - -
Mal4g3987 328 Gene3D Arf GTPase activating protein 8 137 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3987 Mal-Chr4 115123353 115129252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3987 10 328 C2H2 Transcription Factor Family AT4G21160 74.545 0.0 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3987 4 115123353 115129252 Mal4g3987 4 115123353 115129252 ECH