Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3980 ATGAAGCTCTTTAGCCTTTTAGTGTTATCTTTATCTTTCTTTAGTACCATTATGGGGCAGCTTCCTTCACAGGACATTTTAGCATTGTTGGAATTTAAGAAGTGCATTAAGCATGACCCTACTGGTTATGTTCTGAATTCATGGAATGAGGAATCCATTGACTTTGATGGATGTCCATCTTCATGGAATGGTGTTCTTTGTAACGGCGGTAATGTTGCTGGTGTTGTCCTTGATAACTTAGGTCTATCTGCTGATTCTGATTTGAGTGTTTTTTCAAACCTTTCAAAGCTTGTGAAACTTTCTATGTCCAACAATTCCATATCAGGAAAACTACCTAATAACATTGCCGATTTCAAAAGCCTTGAATTTCTTGATATTTCCAATAATCTCTTTTCCTCGTCCATACCGGCTGGAATCGGTAAATTTGGTAGCTTGCAGAACCTATCGTTGGCCGGGAATAACTTTTCTGGTCCAATTCCAAATTCTATTTCAGAAATGGCTTCCATTAAATCTTTGGACTTGAGCCGCAACACCCTTTCTGGAGCGCTGCCATCGTCGCTGACTAAGCTGAATAGTCTTGTTTCGCTTAACTTGTCCTATAATAGCTTCACCGGAAAAATTCCCAAAGGTTTCGAGCTTATTTCCAGCCTTGTCAAGCTCGACTTGCATGGGAATATGTTTGATGGTCCTTTAGACGTTGAGTTTATGCTTTTATCTAGTGCTAGCTATGTTGATTTAAGTGATAATATGCTACTGAGTTCCGCTTCTGGGAAATTTCTACCGGGAATATCTGAAAGTATTAAGTATCTGAATCTAAGCCACAACCAGCTTACTGGTATATTGGTTGGTGGAGCTGAACAACCTGTTTTCCAAGACTTGAAGGTGTTGGATCTCAGCTATAACCAATTGAATGGAGAATTACCTGGATTTGATTTTGTTTATGATCTCCAAATCCTTAAGCTTAGCAACAACAGATTTTCAGGGTTTATTCCTAATGGCTTACTTAAAGGAGACTCTTTGGTTTTAACTGAACTTGATTTGAGTGCCAACAATCTCTCAGGGCCATTGAGTATGATTACATCGACAACACTTCACTTTCTGAATCTCTCATCGAACGGTTTCACCGGTGAGCTGCCACTACTGACTGGAAGTTGCGCTGTCCTTGATCTGTCAAATAACAAATTTGAAGGAAATTTAACCAGGATGCTGAAATGGGGGAACATAGAATATCTAGATCTTGGTGGGAATCGTTTGGCAGGGAACGTCCCTGAGGTAATGCCTCAGTTTTTGCGATTGAATTATTTGAATCTATCTAATAATAATCTCAGTGATGACCTTCCAAAAGTGTTAACACAGTATCCAAAGCTTAGAGTGCTTGATATCAGTTCCAACCAATTAAAAGGCTTTCTTCTAACTGAATTTTTCACTATGCCAACATTACAAGAGCTCCATCTTGAAAATAATTTGATCAATGGTGGCATCAATTTATCGTCTTCTCTTGACCAATCTCATCTTCAAGTTCTTGACCTTTCTCACAACCAACTTAGTAGCTTTTTTCCTGATGAGTTTGGATCGTTAACTAGCCTGAGAGTCCTCAACATTGCTGGAAACAACTTTGTTGGTTCTCTTCCAACCACTATTGCTGACATGAGTTCTTTAGACTCCCTTGATATATCAGATAATCGTTTTACCGGTCCACTTCCAAATAACATGCCAAAGGGACTCAAAGACTTTAATGCGTCTGAAAATGATCTATCTGGAGTTGTTCCAGAAATTCTTAGGAAGTTCCCTAGTTCTTCTTTCTTTCCTGGGAATGCTAAGTTACATTTTCCAAATAGTCCTCCTGGATCAACCGCTTCACCTGCTGAAAGTTCCAAGGGGAAGTCTATGTCCACAGTTGTTAAAGTAATAATCATAGTCTCATGTGTGGTTGCTCTTTTCATATTAATCTTACTGGCTGTTTTCATACATTACATACGTATGTCACGATCTTCTACATCAGAATATGATACAACTACAAGTAAGGATACTCGCGGTCGCCCTCAACCAGTTATCTCTGGACCGATTCGTCCGACAGAGAGGGGGGGTCCTTTGGTTGTATCAGCTGAGGATCTTGTGGCTTCACGTAAAGGATCACCATCTGAAATAATTAGCCCTGATGAAAAAACTGCAGCTGTAGCTGGATTCTCTCCATCAAAACACAGCCACTTTTCATGGTCCCCTGGGTCCGGTGATTCATTGACTGCTGAAAATCTTGCAAGACTAGATACGAGGTCGCCGGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATACAATATCACTGACACCTGAGGAGCTTTCCAGGGCACCGGCTGAAGTTTTGGGAAGAAGTAGTCACGGTACTTCTTACAAGGCAACTTTGGATAGTGGTTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCGAAACAAAGGAAAGAGTTTGTTAAAGAGATAAGGAAGTTTGCAAACATCAGGCATCCAAATGTCGTCGGTTTGAGAGGTTATTATTGGGGTCCTACGCAGCATGAGAAGCTTATTCTTTCAGATTACATTTCTCCAGGAAGTCTTGCAAGTTTTCTATATGATCGACCGGGAAGAAACGGTCCACCGTTAACATGGGCTCAGAGGCTCAAAATTGCAGTTGATGTAGCACGTGGCCTGAATTATCTCCATTTCGACCGAGCTGTTCCTCATGGAAACCTTAAAGCTACAAATGTTTTGTTAGATACAGCTGATATGAATGCCCGCGTTGCTGATTATTGTCTTCACCGACTTATGACTCAAGCTGGTACTATTGAACAGATTCTTGATGCTGGTGTCTTAGGTTATCGTGCGCCGGAGTTAGCTGCTTCCAAGAAGCCAATGCCTTCCTTCAAGTCAGATGTCTATGCTTTCGGCGTGATACTTTTGGAACTTTTAACCGGAAGGTGTGCCGGTGATGTGATAACTGGTGAGGAGGGAGGTGTTGATCTTACAGATTGGCTAAGATTACGAGTAGCAGAAGGTCGAGGCTCGGAATGTTTCGATGCAACTTTGATGTCAGAAATGGGAAATCCAGTTGTAGAAAAGGGAATGAAGGATGTCCTAGGAATAGCGATTCGATGTATTCGATCAGTTTCTGAAAGGCCTGGAATCAAGACTATATATGAAGATCTTTCTTCTATATAG 3198 0.4103 MKLFSLLVLSLSFFSTIMGQLPSQDILALLEFKKCIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADSDLSVFSNLSKLVKLSMSNNSISGKLPNNIADFKSLEFLDISNNLFSSSIPAGIGKFGSLQNLSLAGNNFSGPIPNSISEMASIKSLDLSRNTLSGALPSSLTKLNSLVSLNLSYNSFTGKIPKGFELISSLVKLDLHGNMFDGPLDVEFMLLSSASYVDLSDNMLLSSASGKFLPGISESIKYLNLSHNQLTGILVGGAEQPVFQDLKVLDLSYNQLNGELPGFDFVYDLQILKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSMITSTTLHFLNLSSNGFTGELPLLTGSCAVLDLSNNKFEGNLTRMLKWGNIEYLDLGGNRLAGNVPEVMPQFLRLNYLNLSNNNLSDDLPKVLTQYPKLRVLDISSNQLKGFLLTEFFTMPTLQELHLENNLINGGINLSSSLDQSHLQVLDLSHNQLSSFFPDEFGSLTSLRVLNIAGNNFVGSLPTTIADMSSLDSLDISDNRFTGPLPNNMPKGLKDFNASENDLSGVVPEILRKFPSSSFFPGNAKLHFPNSPPGSTASPAESSKGKSMSTVVKVIIIVSCVVALFILILLAVFIHYIRMSRSSTSEYDTTTSKDTRGRPQPVISGPIRPTERGGPLVVSAEDLVASRKGSPSEIISPDEKTAAVAGFSPSKHSHFSWSPGSGDSLTAENLARLDTRSPDRLIGELHFLDDTISLTPEELSRAPAEVLGRSSHGTSYKATLDSGLLLRVKWLREGVAKQRKEFVKEIRKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRNGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVITGEEGGVDLTDWLRLRVAEGRGSECFDATLMSEMGNPVVEKGMKDVLGIAIRCIRSVSERPGIKTIYEDLSSI* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3980 1065 Gene3D Ribonuclease Inhibitor 382 499 IPR032675 -
Mal4g3980 1065 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Mal4g3980 1065 Pfam Leucine rich repeat N-terminal domain 23 68 IPR013210 -
Mal4g3980 1065 Gene3D Ribonuclease Inhibitor 178 286 IPR032675 -
Mal4g3980 1065 Gene3D Ribonuclease Inhibitor 287 381 IPR032675 -
Mal4g3980 1065 Pfam Protein tyrosine and serine/threonine kinase 787 985 IPR001245 GO:0004672|GO:0006468
Mal4g3980 1065 PANTHER - 3 1065 - -
Mal4g3980 1065 ProSiteProfiles Leucine-rich repeat profile. 504 525 IPR001611 GO:0005515
Mal4g3980 1065 SUPERFAMILY RNI-like 291 596 - -
Mal4g3980 1065 SUPERFAMILY L domain-like 44 379 - -
Mal4g3980 1065 Pfam Leucine rich repeat 431 490 IPR001611 GO:0005515
Mal4g3980 1065 Pfam Leucine rich repeat 503 563 IPR001611 GO:0005515
Mal4g3980 1065 Pfam Leucine rich repeat 169 226 IPR001611 GO:0005515
Mal4g3980 1065 Gene3D Ribonuclease Inhibitor 500 613 IPR032675 -
Mal4g3980 1065 MobiDBLite consensus disorder prediction 666 697 - -
Mal4g3980 1065 ProSiteProfiles Protein kinase domain profile. 783 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3980 1065 PANTHER OS07G0626500 PROTEIN 3 1065 - -
Mal4g3980 1065 MobiDBLite consensus disorder prediction 666 680 - -
Mal4g3980 1065 Gene3D Phosphorylase Kinase; domain 1 775 860 - -
Mal4g3980 1065 SMART LRR_typ_2 550 574 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 190 213 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 94 117 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 526 549 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 429 453 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 118 142 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 166 189 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 503 525 IPR003591 -
Mal4g3980 1065 SMART LRR_typ_2 313 337 IPR003591 -
Mal4g3980 1065 Gene3D Transferase(Phosphotransferase) domain 1 862 1065 - -
Mal4g3980 1065 SUPERFAMILY Protein kinase-like (PK-like) 786 1061 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3980 Mal-Chr4 114987591 114991496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3980 1 1053 Receptor kinase-like Gene Family AT1G55610 27.527 1.28e-83 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mal4g3980 PK_Tyr_Ser-Thr 3.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3980 - - gmx:100793639 1721.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3980 4 114987591 114991496 Mal4g3980 4 114987591 114991496 ECH