Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3957 ATGGATTACTCGATAGGAGGTGTCAATGGATCCGCTGATGAAGACATTGATAACTTACAAGATGATGGAAAAAGATCTTCCTACAAACGTCTTTCTTCTGCTCAAACATCCATACTTGAAAACTTCATGAAGGAGTGTCGCCATCCAGACGAGGCCCAACGACGTCAATTGGCTGAGGAGGTTGGGCTAGAGCCAAAACAAGTCAAGTTTTGGTTTCAGAATAAGAGGACTTTAATGAAGAATCAAAACGAGCGAGAGAAAAATAACACTCTTCGTCTTGAGAATGACAAGATTCATAATGACAACGTCAAAATGAGAGATGAGAAAGTATCAAACCTTCTTGCAAGGTACATGGAGAAAGAGATATCACTACCCGAGTTTGAGCAAGCTCTTTACTCTATTGAATCATTTCCGCGAGACAGAGAGCTTGAAATTCCATCAAACCAAACGATTTATGGAAGCTCAAGCCATGTTCATGCTCATGGTAACCTAACTATGAGGGGAGGTATGTTTGTGAACAACTCAACACAAAGCTATGATGCACAAAAGACAATGATGTCTCAAGTTGCAGCAATTGCAATGAGAGAATTGCTTAGACTTGTGAGAGTTAATGAGCCTTTTTGGATCAAGTCTTCAAATACTCAAGATGGGAAATACACTCTTCATCATGAAAGCTATGAACAAATTTTCCCTAAGAACAATCATTTTAAAGGTGCTAATGTGTGTCATGAATCCTCCAAATATTCTGGAATAGTGAAGCTTAATGGCATGGAACTGGTTGACATGTTTCTCGATTCGGTCAAATGGACAAACTTGTTTCCAACAATTGTTACCAATGCAGAAACTACCAAAGTCTTTGAAGTTGGTTCGCCAGGAAATCGAGATGGAGCTTTGTTATTGATGAATGAAGAAATGCACATTTTATCGCCTCTAGTGAGGCCTCGCGAATTTAACATTATTCGCTACTGCAAACACGTTGCTGCTGGAGTATGGGTGATTACTGATGTATCATTTGATTCATCTCGACCGAACATTACACCACTTTCTTGCTGTTGGAAACATCCCTCTGGATGCATCATCCACGAAATGCCTCATGGGGTTTGCATGGTTACTTGGATTGAACATGTGGAAGTGGAAGATAAGATTCATACACACCAAGTGTATAGAGATCTTGTTGGTAACTACAATTTATATGGAGCTGAAAGCTGGATTAAGGAGCTTCAAAGAATGTGTGAGAGATCTATCAGCTTTTATGTTGAAATAATACCTGTTGAAGAATCTATAGGAGTGATCCAAACACTTGAAAGGAGGAAGATTATGATGAAGCTTGCTCATAGAATGGTTAAGATGTTCTGTGAATGTTTAACAATGAAAGGTTTCTTGGAATTCCCACATTTAACTTTTGATAGCATTGGTGGGGTTAGAGTCTCTCTTCGCAAATCCACTTGCGCAGGCCGGCCAAATGGCACACTTGTTGCTGCTGCTACCACCCTTTGGCTCCCTCTTCCTGCTCAAAAAGTTTTTGATTTCATCAAAGATCCTGCAAAACGATCTCAGTGGGATGTTCTTTCTTGTGGAAATCCAATGTATGAAATTGCACACATTTCAAATGGACCATATCCTGGCAACCGCATTTCAATTATTCAGCCATTATTCCCTACTGAGAAGCAAATTGTGATTCTACAAGAAAGCTTCACATCTCCTGTGGGATCATATGTTATATATGCTCCAACTGACAGAAAATCTTTGGAAGTGGGCCTAAGAGGTGAAGACCCTAAAGGGTTACAAATCCTTCCATATGGTTTTGTTGTGTGTTCAAAAAGCCAACCAAATGCAACTTTTGAAGCATTCAACCATATTGGAAGTAGTAGCAGTGCTGAAAGATTAGGACCTGGCACATTGTTAACTTTGGCATACCAATTTCTGACTAGTAGTCCAAATCCAATTGACCAGGAGCTTCATATGGAATCTATTGGTAAAATCAACACTCATTTGGCAAATACTATTCTGAAAGTGAAGGATGCTCTTATGAGATCTGGTTAA 2043 0.3955 MDYSIGGVNGSADEDIDNLQDDGKRSSYKRLSSAQTSILENFMKECRHPDEAQRRQLAEEVGLEPKQVKFWFQNKRTLMKNQNEREKNNTLRLENDKIHNDNVKMRDEKVSNLLARYMEKEISLPEFEQALYSIESFPRDRELEIPSNQTIYGSSSHVHAHGNLTMRGGMFVNNSTQSYDAQKTMMSQVAAIAMRELLRLVRVNEPFWIKSSNTQDGKYTLHHESYEQIFPKNNHFKGANVCHESSKYSGIVKLNGMELVDMFLDSVKWTNLFPTIVTNAETTKVFEVGSPGNRDGALLLMNEEMHILSPLVRPREFNIIRYCKHVAAGVWVITDVSFDSSRPNITPLSCCWKHPSGCIIHEMPHGVCMVTWIEHVEVEDKIHTHQVYRDLVGNYNLYGAESWIKELQRMCERSISFYVEIIPVEESIGVIQTLERRKIMMKLAHRMVKMFCECLTMKGFLEFPHLTFDSIGGVRVSLRKSTCAGRPNGTLVAAATTLWLPLPAQKVFDFIKDPAKRSQWDVLSCGNPMYEIAHISNGPYPGNRISIIQPLFPTEKQIVILQESFTSPVGSYVIYAPTDRKSLEVGLRGEDPKGLQILPYGFVVCSKSQPNATFEAFNHIGSSSSAERLGPGTLLTLAYQFLTSSPNPIDQELHMESIGKINTHLANTILKVKDALMRSG* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3957 680 Coils Coil 81 101 - -
Mal4g3957 680 MobiDBLite consensus disorder prediction 1 30 - -
Mal4g3957 680 ProSiteProfiles START domain profile. 179 416 IPR002913 GO:0008289
Mal4g3957 680 Gene3D - 187 396 IPR023393 -
Mal4g3957 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 20 677 IPR042160 -
Mal4g3957 680 SUPERFAMILY Bet v1-like 438 606 - -
Mal4g3957 680 CDD START_ArGLABRA2_like 183 412 - -
Mal4g3957 680 SUPERFAMILY Bet v1-like 179 413 - -
Mal4g3957 680 SUPERFAMILY Homeodomain-like 24 88 IPR009057 -
Mal4g3957 680 SMART START_1 188 413 IPR002913 GO:0008289
Mal4g3957 680 Pfam START domain 190 413 IPR002913 GO:0008289
Mal4g3957 680 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Mal4g3957 680 Pfam Homeodomain 26 80 IPR001356 GO:0003677
Mal4g3957 680 SMART HOX_1 24 86 IPR001356 GO:0003677
Mal4g3957 680 Gene3D - 12 97 - -
Mal4g3957 680 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 20 677 - -
Mal4g3957 680 CDD homeodomain 25 83 IPR001356 GO:0003677
Mal4g3957 680 ProSitePatterns 'Homeobox' domain signature. 57 80 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3957 Mal-Chr4 114693734 114699384 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3957 20 676 Homeobox Transcription Factor Family AT1G73360 36.072 1.70e-148 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal4g3957 START 1.2e-31 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3957 K09338 - gmx:100795075 694.886