Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3954 ATGGAGCTTGAGCTTGAGCCACAACAAGTGAAGTGGTGGTTTCAAAACACAAGAATGCAGATTAAGATCAAAAATGAAAAATCAGTTAGCGATGCTCTCCGCGCTGAAAATGAAATGATTTTGAAAGACAACTTGGAAATGAAGGAGAGACTGAAGAATTTAGTTTGCCAATCATGTAATGAATCTAATCATTTGAAACAACTTCAGGTTGAAAATGCACGTCTCAAAGAAAGGCATGAGATTTTGGTAAAAACGCTTAGGTACATGGAAAAGCAAGAAGTATCGCTAGAATTAAAGCTAGGTCTTCCTAAAAGCTCATCACATGAAGATTTTCTAGATATTGGTTCAAGTTCAAAAAGTGCTTTAGTTTTGAATGAAGATATGTTGTCGAAACAACCACTATCCGGTAGGGTAGAAATAGAAAAACTAATGATGTTGGATGCTGGAATTGCCGCCAAGCAAGAGTTGCTTAAGCTTTTTGACACCGATGAGGCGTCCTTATTATGGATCAAGTCTAAAGTTAATCGAAAACTTGTTCTTCAACAAGAAAACTATGAAAAGGACTTCCCTAGGGTTGATCACTTCAATGGCGTCGAAACACATGTTGAATCATCAAAAGATTCACGAATACTGGGAATTGGAGCAACACATTTGGTTGACATGCTTCTAGATTCGGAAAAATGGACAAATCTTTTCCCAACAATTGTTAGCAAAGCTGAGACAATCAAAGTGCTTGAAAGAGGCTCCTCACAAAATCAAAGTGGAGCTTTGTTGTTGATGCATGAAGAGATGCATGTTCTTTCACCTTTAGTGAAACCAAGGGAATTTTACTTCCTTCGCTATTGTGAACAAGTCAAACCTGATATCTGGGTGATAGCTGATGTCTCTTATGATTACTTGAAAGAGGATGGACCTCATTCTTCTTCTTGGAGGTTTCCTTCTGGATGTTTGATTCGTCAAATATCTAGTGATTCTTCCCAGGTTTCTTGGATTGAGCATGTGGAAGTGGATGCAAAGATTCAAACGCACATTATGTATAGAGATATTGTCAATAATGCTACTGCATTTGGAGCTGAAAGATGGCTTATGGAACTTCAAAGAATGAGTGAAAGATTTGTTAGTGCTGCACTTGAGCGCATGCCTTTTTATGACTATGGTGTGGTTACTTTACCAGAAGGAAGGAGGTGTGTAATGCAGCTTGGACATAGGGTTGTTAAGGAGTTCTGTAACATTTTAACAATTTCAAGCAAATCAGATTTACCACAATACTTTGCTGATGCTGATGATAGCGTGGTTAGGTTTTCGATTCAAAAAAATGGAAACATGTTGCTGTCAAAGGATCCATTCATTGTTATTGTTGCTAGCTCCATTTCAGTACCTCTCCCATCCCATATTATTTTCGACTTCTTAAGAGATCCTGCAAGACGTTTTGAGTGGGATGAGATTTGTCGAGGAAATCCATGGTATGAAATTGCACACATCTCTACTGGAGCTCATCCTAACCACTATGTATCAATTCTTCAGCCTCTAGTTTCAACTCCCAAAGATGGTGTGAAGATTGTTCAAGAATGTTTCATAGATCCTTTGGGAGCATATATTGTGTATAATCCAGTTGACACACCAGAGCTGAATATGGCAATCAATGGATCTTCTGATTTATCAAATGTGTCACTTATTCCATCAGGCTTTTGCATCTCCGAAGATAGTAAGTCTTTTTTGAATGACAGGGGTGTGAAAATGAAAACAAGAGGTTCATTGCTGACTGTGGTTCTTCAATTGCACATGCCTCGTCCTTTTGTTGGAGATTTTGAAGCTGCAGCTGATGCTTCAAATGCACTCATGACAAAAGTAGTTAAAAGCATAAAACATGCTCTACTCAATGGTTCTGAATTGAAGGGGTTTTAA 1905 0.3822 MELELEPQQVKWWFQNTRMQIKIKNEKSVSDALRAENEMILKDNLEMKERLKNLVCQSCNESNHLKQLQVENARLKERHEILVKTLRYMEKQEVSLELKLGLPKSSSHEDFLDIGSSSKSALVLNEDMLSKQPLSGRVEIEKLMMLDAGIAAKQELLKLFDTDEASLLWIKSKVNRKLVLQQENYEKDFPRVDHFNGVETHVESSKDSRILGIGATHLVDMLLDSEKWTNLFPTIVSKAETIKVLERGSSQNQSGALLLMHEEMHVLSPLVKPREFYFLRYCEQVKPDIWVIADVSYDYLKEDGPHSSSWRFPSGCLIRQISSDSSQVSWIEHVEVDAKIQTHIMYRDIVNNATAFGAERWLMELQRMSERFVSAALERMPFYDYGVVTLPEGRRCVMQLGHRVVKEFCNILTISSKSDLPQYFADADDSVVRFSIQKNGNMLLSKDPFIVIVASSISVPLPSHIIFDFLRDPARRFEWDEICRGNPWYEIAHISTGAHPNHYVSILQPLVSTPKDGVKIVQECFIDPLGAYIVYNPVDTPELNMAINGSSDLSNVSLIPSGFCISEDSKSFLNDRGVKMKTRGSLLTVVLQLHMPRPFVGDFEAAADASNALMTKVVKSIKHALLNGSELKGF* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3954 634 Coils Coil 65 85 - -
Mal4g3954 634 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 625 IPR042160 -
Mal4g3954 634 ProSiteProfiles START domain profile. 138 374 IPR002913 GO:0008289
Mal4g3954 634 Gene3D - 154 370 IPR023393 -
Mal4g3954 634 SUPERFAMILY Homeodomain-like 2 33 IPR009057 -
Mal4g3954 634 SMART START_1 149 371 IPR002913 GO:0008289
Mal4g3954 634 CDD START_ArGLABRA2_like 142 370 - -
Mal4g3954 634 SUPERFAMILY Bet v1-like 140 371 - -
Mal4g3954 634 Pfam START domain 154 370 IPR002913 GO:0008289
Mal4g3954 634 SUPERFAMILY Bet v1-like 390 595 - -
Mal4g3954 634 ProSiteProfiles 'Homeobox' domain profile. 1 24 IPR001356 GO:0003677
Mal4g3954 634 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 2 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3954 Mal-Chr4 114516293 114520763 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3954 2 625 Homeobox Transcription Factor Family AT1G73360 34.598 4.94e-115 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3954 K09338 - gmx:100794552 532.717