Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3937 ATGATTCTTCAATTGACAATATTATTTCATATCATCTTAGCAATAATATCCCCCATATTTCCTCCACTAACATCAGCACAACAAGAAAAAGGAATCATAGCACAACAAGGTTGTAATTCAACATGTGGAACAATGTCAATTCCTTTTCCATTTGGAATGAAAGAACCTCGTTGTTACGCAGATAAATGGTTCGAAATAGAGTGCAAATTAGACAACATCTCTCAAAATCCAAAGCCATATTTGAAGTCTTTAAATCTCGAGGTAAATAAATTTTACGAGTACTTGGACATGGTTGAGATTATGAATCCAATTTATCGTTCAAACTGTGAAAAAAATAATAACAATAAAAATGTTACTATAAACCTTAGAGGAAGTCCTTTCATATATTCTCAGGATGATAACAAATTTCTAGCCGTTGGATGTAACAATCTTGCTTTTCTACAATCAAATGGAACAACGGTTGGTGGTTGTGTATCAATTTGCGATGACACCAACGTTAACAACAATTTCAATTTCCGTAGCGACGGTTGTAATGGAAGATATTGTTGTCAAACTTCATTGCCTATGCATCTTTCAGAATATAATGCAACGTTACAAGGTTTAAAGGAACAAAGAATTGATGAGTGTAGTTATGCATTGATTGTAAGTGATAATTGGGTATCTTTTGATCAGTCATATTTGACTACTTTTGAGATTGAGAAATTTAACGAGTTGGAGAATATGAAGTATGCACCAGCAATGCTTGAGTGGGAAATTTTGAATGATATGTTGATTAATTCGACGATTCAATTTCCTTCAGATTCATATTGCTATGATTCCAATGTTACATCTTTAAGTAACAGAACCACTGGTCGAAAATGTCGATGTTCCTCGGGTTACACTGGCAATCCCTACATTATTGGAGGCTGCACAGAAATTCCAGGATTCTTTGATAAGAACAATCGGTGGAAGAAGTGGGCTATTGTCGGAGTTTCATCAAGTCTCGGATCCATAGGTGTCTTCATTGGTCTATGGTTATTGCACAAAGATATGAAGAAAAGAATGATAAAGAAACGAAAAGAAAAATTCTTCAAAAGAAATGGTGGTTTGTTGTTAAAACAAAGAATGTCTTCAGGAGAAGTAAATGTTGATAGAACTACTCTCTTCACCTTAAAGGATTTAAAGAAAGCCACTGACAACTTTAATAAGAATAGAGTTCTTGGAAAAGGAGGCCAAGGTACAGTTTACAAAGGCATGCTAGTAGATGGTAAAATTGTTGCGGTGAAAAAGTTTAAGGTTGAAGGAAAGGTTGAAGAGTTCATCAATGAGTTTGTTATTCTTTCACAAATCAACAACAGAAATGTTGTCAAATTACTAGGATGTTGTTTGGAGACAGAAATTCCATTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTATTTGCATGACCAAAATGAGGACATACCAATGACATGGGACATGCGATTGAGAATTGCTACTGAAATTGCTGGAGCATTATTTTACTTACACTCAATTGCATCTCAACCCATTTATCATAGAGATATCAAATCTACAAATATACTACTTGATGAAAAGTATAGGGCAAAACTAGCCGATTTTGGAGCATCAAGAATAATTTCAATTGAAGCTACTCACCTTACCACAGCGGTTCAAGGTACTTTTGGTTACTTAGACCCTGAGTACTTTCATACTAGTCAATTTACCGAGAAAAGTGATGTGTACAGCTTTGGAGTAGTTCTTGCCGAACTTTTAACTGGTAAAAAGCCAATATCCTCTATAGGATCTGATGAATACCAAAGTTTAGCTTCCTATTTTATTGAGTGTATAGAGGACAATATGTTGTTTGATATTATTGACAAAAGGGTCGCAAAAGAAGGGGAGAAAGAACATGTTATTGCAATTGCAAATCTTGCATATAGATGCTTAGAGTTGAATGGAAGAAAACGACCAACTATGAAAGAAGTTACATTAGAATTGGAAGGGATTAGAGGATTGAATATGAAACTTAGTGCACAACAAAACCATGAGGAAATTGAACTTGCTACAATTGAAGAGTACCAACCTTGGGATGGATTTTCCCCATCAAATTCATTGTCCATTGTTGAGAGCCAAACATATTCCACAGACTCGGAGGTTATGCATATTATTTCATTGAAGTAG 2169 0.3476 MILQLTILFHIILAIISPIFPPLTSAQQEKGIIAQQGCNSTCGTMSIPFPFGMKEPRCYADKWFEIECKLDNISQNPKPYLKSLNLEVNKFYEYLDMVEIMNPIYRSNCEKNNNNKNVTINLRGSPFIYSQDDNKFLAVGCNNLAFLQSNGTTVGGCVSICDDTNVNNNFNFRSDGCNGRYCCQTSLPMHLSEYNATLQGLKEQRIDECSYALIVSDNWVSFDQSYLTTFEIEKFNELENMKYAPAMLEWEILNDMLINSTIQFPSDSYCYDSNVTSLSNRTTGRKCRCSSGYTGNPYIIGGCTEIPGFFDKNNRWKKWAIVGVSSSLGSIGVFIGLWLLHKDMKKRMIKKRKEKFFKRNGGLLLKQRMSSGEVNVDRTTLFTLKDLKKATDNFNKNRVLGKGGQGTVYKGMLVDGKIVAVKKFKVEGKVEEFINEFVILSQINNRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHDQNEDIPMTWDMRLRIATEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKLADFGASRIISIEATHLTTAVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTGKKPISSIGSDEYQSLASYFIECIEDNMLFDIIDKRVAKEGEKEHVIAIANLAYRCLELNGRKRPTMKEVTLELEGIRGLNMKLSAQQNHEEIELATIEEYQPWDGFSPSNSLSIVESQTYSTDSEVMHIISLK* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3937 722 Pfam Wall-associated receptor kinase galacturonan-binding 38 82 IPR025287 GO:0030247
Mal4g3937 722 SMART serkin_6 394 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3937 722 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 720 IPR045274 GO:0007166
Mal4g3937 722 SUPERFAMILY Protein kinase-like (PK-like) 379 665 IPR011009 -
Mal4g3937 722 Gene3D Transferase(Phosphotransferase) domain 1 468 689 - -
Mal4g3937 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Mal4g3937 722 ProSiteProfiles Protein kinase domain profile. 394 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3937 722 Gene3D Phosphorylase Kinase; domain 1 365 467 - -
Mal4g3937 722 Pfam Protein kinase domain 394 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3937 722 CDD STKc_IRAK 400 665 - -
Mal4g3937 722 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 15 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3937 Mal-Chr4 114192730 114198039 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3937 33 716 Receptor kinase-like Gene Family AT1G16260 42.857 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mal4g3937 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3937 - - mtr:MTR_2g031530 1201.42