Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3895 ATGTTGAAGTTCAATATTACATGGCACCACAAAACCCTAATCTATTATCTCAAAGGATTAACTTCCCCACAAAAATCACTATCCCCAAACCCTAACCCTAACCCTCTTTTCCAACATTACCCTTCTCTGCAATTCTCCACCAAAACTTCTGATTCAACCTCATTTCCAGTCTCATACCTCATCCACAATTTTGGGTTTTCCCCACAATCTGCTTCCAAACTCTGCTCCACATACAATGTCCGTTTTAAAACTGCCCAAAAACCTGATTCTGTTCTCAATTTCTTTAGAAACCATGGTTTCTCTGATTCCCAATTACGTCATATCATTGCAAAGGAACCACGACTACTTTCCTGCAACCCCGGCAAAACATTGCTGCCAAAGTTTCAATTTTGTCTCTCCAAAGGTGCTTCTACCTCTGACATTGTTAACATTGTATGTAAGAGACCCCAATTTTTGTCTTCAAGCCTCGAGAATCAAATAGTCCCAACCTATGAATTCATTTATAGATTCTTGCAATCTCACAACGACACTATTGCTTGTGCAATTCACAATCCAGTTTTACTTTGTGACAATCGTGTGCAAGATAACATCACATTGTTGGTTGAGAATGGAGTGGCCGACTCAAACATTACAAGATTGCTTCAGTCCCGGACCCGGTGTCTGTCAATCCACACACGTGACATAGCAAAGTTAGTGGAGGAGTTAAAGGATTTGGGGTTTAATCCTTCAAAAACAACTTTTGGTAAACAGAAAGTAGATGCCTTTAAGAAGTGGGGTTGGTCTGATGAAGATGTTGTGAAAGCATTTACAAAGCAGCCTTATTGTATGTTAACATCCATTGATAAAATTAATTTAGTGATGAGCTTTTGGGTCAATCAGTTGGGTTGGGATTCTCTAGTCATTGCCGAAACACCTAATATTTTGTTGTCAAGTTTGGAAAAAAGGATCATTCCGAGGGCTGCTGTTGTGCAACATCTTCTCAACAATGGTTTGCGAAGTAAGAACGCAGGCTTAATTTATCCATTCTTATTGTCTGAGAAGTTGTTTCTTGATAAGTTTATAAAACGTTTCGAGAATGAGGCTTCTTATCTTTTAAAGCTGTATGAGGAAAAACTCAATCTTGCATACACCACGGACAAAAATTTCATGTAA 1152 0.3872 MLKFNITWHHKTLIYYLKGLTSPQKSLSPNPNPNPLFQHYPSLQFSTKTSDSTSFPVSYLIHNFGFSPQSASKLCSTYNVRFKTAQKPDSVLNFFRNHGFSDSQLRHIIAKEPRLLSCNPGKTLLPKFQFCLSKGASTSDIVNIVCKRPQFLSSSLENQIVPTYEFIYRFLQSHNDTIACAIHNPVLLCDNRVQDNITLLVENGVADSNITRLLQSRTRCLSIHTRDIAKLVEELKDLGFNPSKTTFGKQKVDAFKKWGWSDEDVVKAFTKQPYCMLTSIDKINLVMSFWVNQLGWDSLVIAETPNILLSSLEKRIIPRAAVVQHLLNNGLRSKNAGLIYPFLLSEKLFLDKFIKRFENEASYLLKLYEEKLNLAYTTDKNFM* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3895 383 PANTHER CGI-12 PROTEIN-RELATED 28 376 IPR003690 GO:0003690|GO:0006355
Mal4g3895 383 Pfam mTERF 92 241 IPR003690 GO:0003690|GO:0006355
Mal4g3895 383 Pfam mTERF 250 334 IPR003690 GO:0003690|GO:0006355
Mal4g3895 383 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 376 - -
Mal4g3895 383 Gene3D Transcription termination factor 3, mitochondrial 169 362 IPR038538 -
Mal4g3895 383 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Mal4g3895 383 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Mal4g3895 383 SMART mt_12 211 241 IPR003690 GO:0003690|GO:0006355
Mal4g3895 383 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Mal4g3895 383 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3895 Mal-Chr4 113227057 113228250 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3895 mTERF 5.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3895 K15032 - gmx:102663414 356.681