Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3894 ATGTTTCAGACACATAACAATTTCTGCAATTCTCCAATGTTGAAATCTCTACGCTTCGAACCCTTCTTTCTTTACCCAAATCGAATCACAACAATACCCTTTCCAACCCCAAAATTCAATTCAACCCTCTCTTTCAACCATTCCTCTTCAACCACTTCACAACAAACCCAATTCACAGTTTCATATCTCATTACCAATTTCGGTTTCTCATCAGAAACCGCTACAAAAGCTTCAAAACTCGTTCAATTCGACACTTCCGAAAAACCCGATTCAGTAATCACAATCTTCAAAAACTACGCACCCAACATTCTTAAATGTGACCCACACAAAAGGGTTTTGCCAAAGTTTGAATATTTAACCTCAAAAGGTGCTTCAAATTCTGATATTGTGGAGATAGTTACAAGAAGTCCTAGAATTCTCTATTCAAGTCTTGAGAATAGTATAATCCCTACTTTTGATTTGGTAAGAAAGTTTCTTCCTTCTAATGAGAAAGTTATTGAACGTGTACTTCGATGTAGATTTTTCTTTGGTCATCAACATGTTATTAGAAATGTTAAGATGTTACTTGATTATGGAGTTACTCACTCAATTATCACCTCTTTATTGCTTAGAAGACCGTCTATATTTTTGTTTTATGATATGAAGAATGCTTTGGATTTGGTTAAGGAAATGGGATTTGATGATCCTACCAATGTGAATTTTTGTTATGCATTGTTAGCTAAGAGGGGTATGTCGAAATCTCGTTGGGATGCTAAAGTTAGTGTCTTTAAGAAATGGGGTTGGTCAGAAGAAATGGTTCTTGAAGCGTTTAGGAAGCGGCCATTGTTTATGCTATCATCCACGGAGAAAATTAATAAGGTGATGAAATTTTGGGTCATCGAGTTGGGTTGGGACTCTTCGGCTCTTGTCAAAAGGTCGGAGGTTTTTTCGTTTAGTTTGGAGAATAGGCTCATTCCGAGGGCTTGTGTTGTCTTGTATTTGATCTCCAAAGGTTTGATAGTAAAGAATATTGAATTGTCTACTCCATTTGGTGTTAGTGAAAAGGTGTTTCTTAAAATGTATGTGCAGCGTTTTAAGGAGGAAGAAAGACATAATTTGTTAAAGCTATACAAGGAAAAAATGGGTGCTCAAAAAATCAGGGAGGATGGTGTAGCATCTGGAAGCTGA 1167 0.365 MFQTHNNFCNSPMLKSLRFEPFFLYPNRITTIPFPTPKFNSTLSFNHSSSTTSQQTQFTVSYLITNFGFSSETATKASKLVQFDTSEKPDSVITIFKNYAPNILKCDPHKRVLPKFEYLTSKGASNSDIVEIVTRSPRILYSSLENSIIPTFDLVRKFLPSNEKVIERVLRCRFFFGHQHVIRNVKMLLDYGVTHSIITSLLLRRPSIFLFYDMKNALDLVKEMGFDDPTNVNFCYALLAKRGMSKSRWDAKVSVFKKWGWSEEMVLEAFRKRPLFMLSSTEKINKVMKFWVIELGWDSSALVKRSEVFSFSLENRLIPRACVVLYLISKGLIVKNIELSTPFGVSEKVFLKMYVQRFKEEERHNLLKLYKEKMGAQKIREDGVASGS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3894 388 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 35 376 - -
Mal4g3894 388 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Mal4g3894 388 SMART mt_12 199 227 IPR003690 GO:0003690|GO:0006355
Mal4g3894 388 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Mal4g3894 388 SMART mt_12 93 125 IPR003690 GO:0003690|GO:0006355
Mal4g3894 388 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Mal4g3894 388 Gene3D Transcription termination factor 3, mitochondrial 171 364 IPR038538 -
Mal4g3894 388 Pfam mTERF 93 285 IPR003690 GO:0003690|GO:0006355
Mal4g3894 388 Pfam mTERF 245 350 IPR003690 GO:0003690|GO:0006355
Mal4g3894 388 PANTHER CGI-12 PROTEIN-RELATED 35 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3894 Mal-Chr4 113212927 113214132 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3894 mTERF 2.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3894 K15032 - gmx:102666622 376.326