Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3888 ATGTTGATCTCCCATGCTGATCACGTTAGGAAAAGAACAGGAGAAACCTATTCAGTGACTTCAAGCAACAAGACAGTGAGGAGGATTCGTGTTAGAGGTGGAAATGTGAAGTGGAGAGCTATGAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCCGTCACTCGCATGACCCGTTTGCTCGATGTGGTTTACAATGCTTCCAACAATGAGTTGCTCAGAACTCAGACCCTTGTGAAGAGTGTTATTGTGCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAACACTATGGTGTTGAAATCGACAGGAAAAAGAAAATTGTTGGCAAGAAGACGAGTGTAGTGAATATGCTGAACATCTGCAGTCCCATAATTTATGATATTCATGTTCTGGATCAGTTAGTTATTGGCTATCTTTTTTACTTTCAGGAGATTGCTATAAAATGGGGCAAGGGCTTGGCTCAAAAGTTGGAAGCTGAGGCTAAGAAGTTGAGAAGGAAAAGCCTTTTGTGCAGACCAGGTATACACAAAGAAAGTAGCGTTGTAGACTGGCTTAAATTTGTTATCTTAATACTGCAGTAA 591 0.4196 MLISHADHVRKRTGETYSVTSSNKTVRRIRVRGGNVKWRAMRLDTGNFSWGSEAVTRMTRLLDVVYNASNNELLRTQTLVKSVIVQVDAAPFKQWYLQHYGVEIDRKKKIVGKKTSVVNMLNICSPIIYDIHVLDQLVIGYLFYFQEIAIKWGKGLAQKLEAEAKKLRRKSLLCRPGIHKESSVVDWLKFVILILQ* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3888 196 Gene3D - 19 119 - -
Mal4g3888 196 PANTHER CMV 1A INTERACTING PROTEIN 1 21 116 - -
Mal4g3888 196 CDD Ribosomal_S8e_like 21 111 - -
Mal4g3888 196 Pfam Ribosomal protein S8e 22 93 IPR022309 -
Mal4g3888 196 PANTHER 40S RIBOSOMAL PROTEIN S8 21 116 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3888 Mal-Chr4 113105939 113110468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3888 21 143 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 67.176 6.44e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3888 K02995 - pda:103714175 175.252