Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3878 ATGTCTTCTTCTTCTTCTTCATGGCTAACTTCTCCTTCATGCACCCTTTTACCTTTATATTCATCTTCCTCTACACCAAACCTCATACTTCAATGGTTAAGGTTCATTTTGCTATCTCCATGTCCTCAAAGACTTCTTCTTTCTGCTCTTGATTCCTTCTTTTTGCTCTTCCTCTTAGCTTTTGCAGCTCACAAATACTATTCAAGGTTCAATTCAAGTTCCAACTTTACCTCCTCAATCACAAAACCACTTCTACATGAAAAAGATTCTGACTATAAAATCACCTTTTGGTTCAAACTACCTTTGTTGGTTACTACCATTTTGGCTATAACTTACATTGTTCTAGGAATCTTGGCTTTTACTCAAACTAATAACTTTGATTCATGGAAACAAATAGAAGCACTTTTTCGGCTCTTTCAAGCAATAACCAACACAGTGATAGTGATTCTAATGATACATGAGAAAAAGCTTAAATCTTCCAAACACCCTTTATCACTAAGAATCTATTGGATAGCAAATTTTGTGATTGCTACTTTGTTTGCTGCTTCGTCTATTGTTCGAATGATAGCTGTCGGTGAAGAAAAGTTGGAGCTTAGTTTGAGAATAGATGACATATTCTCATTGGTTAATCTTCCATTATCTGTGTTCTTTTTTGTTGTATCCGTAAAAGGGTCATCAGGGATTCATGTCATAAGAATGTCGGATGTTGTAGCAACATATCCATCGATCGATAGAACTTTGAGTCCTTATGCTTGTTCTTCATTTTTGTCCAAAACAGGGTGGTTTTGGATGAACCCTTTGCTTAAGAAAGGTTACAAAACACCCCTTAAACTAGAAGGTGTTCCTTCACTTCCTCTTGAATTTAGAGCAGAAAAAATGTCAGAACTTTTTCAAAACAATTGGCCAAAACCAGAGGAAAACAGTAAGCATCCAGTAGGAGTAGCCTTATTTAGGTGTTTTTGGAAACAAATAGTTTTCACTGGTTTCCTTGCAATCATTAGGCTTTGTCTTATGTATGTTGGTCCATTGTTGATTCAGAGTTTTGTTGATTTCACATCAAGGAAAGATAGTACTACTAGTGAAGGTATTTTTTTGATATGTATCCTTTTTGCAGCAAAATCAGTTGAAGTACTTAGTGTTCATCAATTCAACTTCTACTCTCAGAAACTTGGTATGCTTATTCGTTCGAGCATAATCACTTCTGTTTACAAAAAGGCTTTAAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGACAGATTGTGAATCACATGGCTGTTGATGCTCAACAGCTCTCAGACTTGATGATGCAGTTTCATCCTATATGGTTGATGCCATTGCAAGTTTCTGCTGCATTGGCTCTTATGTATAGCTATGTTGGTGTATCTGTTCTTGCAGCAATTCTTGGAACTACCGTAGTTTTGTTTTTCACCCTATATGGAACGAAGATTAGTAATAGTTTCCAGTTTCAGATAATGACAAGCCGCGATTTGAGGATGAAGGCAACAAATGAGTTGCTTAACAACATGCGTGTGATTAAGTTTCAAGCATGGGAAGAGTATTTCGGTAACAAAATTCAACAGTTTCGTGAAGCCGAGCATGGATGGATTGGAAAATTCATGTACTGGTTTGCTGTTAACATTGGAGTTATGTCTACTGCGCCATCAACAGTAGCTGTTCTTACCTTTGGAACTGCAACTTTTATTGGAATTCCTTTGAATGCAGGCACTGTTTTCACAATAATTTCGATTATCAAGATACTTCAAGAGCCTTTGAGGACTTTTCCTCAGGCTCTTATCATGATTTCTCAAGCAACAACATCTCTAGGGAGGCTGGATGAGTTCATGATGAGTAAGGAAATGGATGAGAATGCAGTGCAAAGAGAGGAGAATTGTGATGGTGATGTAGCTGTGGAGATAATAGATGGGAAATTCTCATGGGATGATAAGGATGAGAATGAGTCTCTGAGAGTTGAAGAGTTTGTAATTAAGAAAGGGAATCATGCTGCTGTTGTAGGAACTGTTGGTTCAGGCAAGTCTTCATTATTGGCTTCTGTGTTGGGAGAAATGTTCAAGATCTCAGGAAAGGTCCAAGTTTGTGGAACGACGGCATATGTAGCTCAAACATCATGGATTCAGAATGCAACCATAAAAGAAAACATATTGTTTGGTTTACCAATGAACATGGATAAATACAGGGAAGCATTAAGAGTGTGCTGCCTTGAAAAGGATCTTGAAATGATGGAAGATGGTGATCAAACCGAGATTGGAGAGCGCGGTATTAACCTCAGCGGCGGCCAGAAACAACGTGTACAACTTGCTAGAGCTGTATATCAGGACACCGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGACGCTCAAACAGGATCTTTTATTTTTAAGGAATGTATCATGGGAGCTCTCAAAGATAAGACTGTTTTACTTGTAACGCACCAAGTTGATTTCTTGCATAATGTTGACTCTATAATGGTGATGCGTGAAGGGAGAGTAGTGCAAAGTGGAAAGTATGATGAACTTCTCAAAGCAGGCCTAGATTTTGGTGCACTTGTGGCAGCTCATGAATCCTCAATGGAGATAGCAGAAACAAGTGATGGTTCAGCTCAATCTCCAAAACTAGCTCGCGTCGCATCGAAAGAAAAAGAAAGGTGCGGCGAAAAGCAATCTTCTCAAGATCAATCTAAGTCTGATAATACTGCAGCAAAGCTCATTGAAGATGAGGAAAGAGAAATTGGACGTGTGAACCTTAAAGTATACAAACACTATTTCACAGAAGCATTTGGATGGTGGGGAGTAGTAATGATGGTAGCAATGTCAGTGGCTTGGGTGTTGTCATTTTTGGCTGGTGATTATTGGCTAGCATTTGCAACTTCAGATGATTCTGGCATTCCTTCTCTTACTTTCATTATTGTCTATGCTGCTATAGCTGTTGTTGGATGCATAGTTGTTATGGTACGAGCTTTCTTGTTTACATATTTGGGTTTAATGACATCTCAAAGCTTCTTCATTGGAATGCTTCAATGTATCCTTCATGCACCAATGTCATTCTTTGATACCACTCCTTCTGGTAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGGTGGATATATATATTCCAATGTTCGTAAACTTTGTAATGATAGCATACTTATCATTATTCGGTATCCTCATTGTCACATGCCAGAATTCTTGGGAGACTGTCTTCCTCCTAATTCCACTGGTTTGGCTCAACAACTGGTATAGGAAATTTTATCTTGCAACTTCTAGGGAATTGACTCGACTTGATTCAATCACAAAGGCGCCAGTGATTCATCACTTTTCAGAGACCATTTCTGGTGTTATGACAATTCGTAGCTTAAGAAAGCAGAATGCATTTTCTCAGGAAAATATTGACAGGGTTAATGCAAGTCTAAGAATGGATTTTCATAACAATGGTGCAAATGAATGGCTTGGTTTTCGCTTGGACTATATGGGAGTAGTTTTCCTTTGCATTGCCACCGTTTTTATGATCTTTTTGCCAAGTGCTATTGTTAAGCCAGAATATGTTGGTATGTCTCTATCCTATGGCCTGGAACTTAGTGGTCTCTTGTCATTAACCATAACTATGACTTGCAATGTTGAGAACAAAATGGTTTCAGTTGAGAGGATAAAGCAGTTTACTAACCTTCCATCAGAAGCTCCATGGAAAATTGCTGATAAGTCTCCTCCTCAGAATTGGCCTAGTCATGGCACTATAGAGCTAAATAATTTACAGGTTAGGTATAGGCCAAACACTCCTCTAGTTCTAAAGGGAGTCTCTCTAACCATTGAAGGTGGAGAAAAAGTTGGTGTTGTTGGTCGTACAGGAAGTGGAAAATCAACACTCATTCAAGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAAAATAATCATTGATGGTATTAACATTTCCAATGTTGGCCTTCATGATTTGAGGTCACGTTTTGGAATTATTCCACAAGAGCCTGTCCTCTTTCAAGGAACTGTAAGAACCAACATTGATCCTCTAGGATTGTATTCAGAAGAAGAAATTTGGACGAGTCTTGAGCGGTGCCAATTGAAAGAAGCGGTGGCTGCAAAGCCTGAGAAGCTTGAAGCTTCTGTTGTTGATGGTGGAGACAATTGGAGTGTGGGGGAAAGGCAACTTCTATGCTTGGGAAGGATCATGCTAAAACGAAGCAAAATACTATTCATGGATGAAGCAACAGCATCAGTTGATTCACAAACTGATGCTGTAATTCAAAAGATCATCAGAGAAGACTTTGCAGATCGTACAATTATTAGCATTGCTCACAGAATACCAACAGTTATGGATTGTGACAGGGTTATGGTCATAGATGCAGGTTTGGCAAAGGAATATGACAAGCCATCACGTTTGCTTGAAATGCCTTCACTTTTTGCAGCATTGGTTAAAGAGTATTCTAATAGATCAGCTTAA 4491 0.3866 MSSSSSSWLTSPSCTLLPLYSSSSTPNLILQWLRFILLSPCPQRLLLSALDSFFLLFLLAFAAHKYYSRFNSSSNFTSSITKPLLHEKDSDYKITFWFKLPLLVTTILAITYIVLGILAFTQTNNFDSWKQIEALFRLFQAITNTVIVILMIHEKKLKSSKHPLSLRIYWIANFVIATLFAASSIVRMIAVGEEKLELSLRIDDIFSLVNLPLSVFFFVVSVKGSSGIHVIRMSDVVATYPSIDRTLSPYACSSFLSKTGWFWMNPLLKKGYKTPLKLEGVPSLPLEFRAEKMSELFQNNWPKPEENSKHPVGVALFRCFWKQIVFTGFLAIIRLCLMYVGPLLIQSFVDFTSRKDSTTSEGIFLICILFAAKSVEVLSVHQFNFYSQKLGMLIRSSIITSVYKKALRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVSAALALMYSYVGVSVLAAILGTTVVLFFTLYGTKISNSFQFQIMTSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIGKFMYWFAVNIGVMSTAPSTVAVLTFGTATFIGIPLNAGTVFTIISIIKILQEPLRTFPQALIMISQATTSLGRLDEFMMSKEMDENAVQREENCDGDVAVEIIDGKFSWDDKDENESLRVEEFVIKKGNHAAVVGTVGSGKSSLLASVLGEMFKISGKVQVCGTTAYVAQTSWIQNATIKENILFGLPMNMDKYREALRVCCLEKDLEMMEDGDQTEIGERGINLSGGQKQRVQLARAVYQDTDIYLLDDVFSAVDAQTGSFIFKECIMGALKDKTVLLVTHQVDFLHNVDSIMVMREGRVVQSGKYDELLKAGLDFGALVAAHESSMEIAETSDGSAQSPKLARVASKEKERCGEKQSSQDQSKSDNTAAKLIEDEEREIGRVNLKVYKHYFTEAFGWWGVVMMVAMSVAWVLSFLAGDYWLAFATSDDSGIPSLTFIIVYAAIAVVGCIVVMVRAFLFTYLGLMTSQSFFIGMLQCILHAPMSFFDTTPSGRILSRVSTDILWVDIYIPMFVNFVMIAYLSLFGILIVTCQNSWETVFLLIPLVWLNNWYRKFYLATSRELTRLDSITKAPVIHHFSETISGVMTIRSLRKQNAFSQENIDRVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATVFMIFLPSAIVKPEYVGMSLSYGLELSGLLSLTITMTCNVENKMVSVERIKQFTNLPSEAPWKIADKSPPQNWPSHGTIELNNLQVRYRPNTPLVLKGVSLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINISNVGLHDLRSRFGIIPQEPVLFQGTVRTNIDPLGLYSEEEIWTSLERCQLKEAVAAKPEKLEASVVDGGDNWSVGERQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDRVMVIDAGLAKEYDKPSRLLEMPSLFAALVKEYSNRSA* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3878 1496 SMART AAA_5 1282 1466 IPR003593 -
Mal4g3878 1496 SMART AAA_5 666 847 IPR003593 -
Mal4g3878 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 858 IPR027417 -
Mal4g3878 1496 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524
Mal4g3878 1496 CDD ABCC_MRP_domain1 639 839 - -
Mal4g3878 1496 Gene3D - 634 865 IPR027417 -
Mal4g3878 1496 SUPERFAMILY ABC transporter transmembrane region 938 1236 IPR036640 GO:0005524|GO:0016021
Mal4g3878 1496 Gene3D ABC transporter type 1, transmembrane domain 314 621 IPR036640 GO:0005524|GO:0016021
Mal4g3878 1496 CDD ABCC_MRP_domain2 1254 1474 - -
Mal4g3878 1496 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 61 1496 - -
Mal4g3878 1496 MobiDBLite consensus disorder prediction 888 908 - -
Mal4g3878 1496 Pfam ABC transporter transmembrane region 960 1182 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g3878 1496 Pfam ABC transporter transmembrane region 326 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g3878 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1256 1490 IPR003439 GO:0005524
Mal4g3878 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 938 1219 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g3878 1496 Pfam ABC transporter 662 790 IPR003439 GO:0005524
Mal4g3878 1496 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 61 1496 - -
Mal4g3878 1496 Coils Coil 1127 1147 - -
Mal4g3878 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 639 862 IPR003439 GO:0005524
Mal4g3878 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 325 605 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal4g3878 1496 Pfam ABC transporter 1273 1421 IPR003439 GO:0005524
Mal4g3878 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1245 1489 IPR027417 -
Mal4g3878 1496 Gene3D ABC transporter type 1, transmembrane domain 904 1237 IPR036640 GO:0005524|GO:0016021
Mal4g3878 1496 SUPERFAMILY ABC transporter transmembrane region 316 617 IPR036640 GO:0005524|GO:0016021
Mal4g3878 1496 CDD ABC_6TM_ABCC_D1 326 613 IPR044746 GO:0140359
Mal4g3878 1496 Gene3D - 1239 1489 IPR027417 -
Mal4g3878 1496 CDD ABC_6TM_ABCC_D2 941 1231 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3878 Mal-Chr4 112778792 112815478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3878 639 881 Calmodulin-binding Proteins AT2G36910 29.658 1.91e-25 113