Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3871 ATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTTGGCTATCAATGCAATGACGACAGAGGTATCCCTTGCAAGGTTGCTAATGGCTGCAAAATACGCCCTGAAATGCGAAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCTTAAGTGCAAATGCTACACTTGCCAATACAAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCAAATTTGGACTCTCCTAATTCATTTCGCCGGGTACCCTCTTCGCCGAGTCTCGGAATGTTGGACATGCTATCATCTTCTCTTCATAGTAGTTTGTCAAACCTAAGTTGCAGCCCGTCAAGTCCAAGTAATATGCTTGAATATGATCCTTGTTCGTTAAAATTCATGAGTGCTCCTTCTAGAAGTGAAGGTTTTCTTAGTGCTACTGAAGTACAAGTAGCGGGAGGAGCTGCTGGTGAAGATAGAGTTCAGGCAGTTTGTTCCGAAGAAAATGGTTGGCTTTTTTGTGCAATTTATGACGGCTTTAATGGGAGAGATGCAGCGGACTTTCTGGCTTGTACCCTTTACGACTCTATTGTATCTTATCTAAATACAATAGATTGGGATTCGAAACCAAATTCCATCAACGCTTCTGACAACGAAGGATTCGATGATAGTCGTATTCTTCACGAGCATCAATCTTCATTGAGTAAATCATTTTCTCATGTGGTACTTGATAGCCTCAAACATGTTCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAAGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAACGATTTGTGTACACTCAATCTAGGAGACAGTAGAGCAGTGCTTGCAACATGCAGTGATGGAACAAATGGGAATGAGAGGTTGAAAGCTATTCAGCTTACTGATAGTCATACCGTTGACAATGAAGCTGAAAGAGCTCAACTTCTTGCCGATCATCCTGATGATCCGAAGACCATTGTATCAGGGAGAGTGAAAGGAAAATTGAAGGTTACGCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCGAGTACGTGATCTCAAGAGCCCGCCATATGTTTCGACCGAACCATCACTGAACGTGCATAAAATCTCTACTTCTGATCAATTTGTTATAGTTGCGAGTGATGGTTTATTTGACTTCTTCAGCAATGAGGAAGCAGTGAATCTTGTAGAGTCTTATATCTTTAGCAATCCTCATGGCGATCCAGCTAAATTTCTCATTGAAGAATTAGTAGAAAAAGCAGCTAATTCTGCAGGTTTTAGCACGGAGGAGTTGATGAACATTCCGGCTGGGAGGAGGAGGAAGTATCATGATGATGTCACTGTAATGGTAATCATCCTTGGGATGAATAAACGGACTTCAAAGGCGTCAATTTGCATCTAA 1470 0.4129 MLSPEGELKISFGYQCNDDRGIPCKVANGCKIRPEMRRTSSFSCLSGAALSANATLANTNICNGVIGEEILPNLDSPNSFRRVPSSPSLGMLDMLSSSLHSSLSNLSCSPSSPSNMLEYDPCSLKFMSAPSRSEGFLSATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLACTLYDSIVSYLNTIDWDSKPNSINASDNEGFDDSRILHEHQSSLSKSFSHVVLDSLKHVLSQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLCTLNLGDSRAVLATCSDGTNGNERLKAIQLTDSHTVDNEAERAQLLADHPDDPKTIVSGRVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLKSPPYVSTEPSLNVHKISTSDQFVIVASDGLFDFFSNEEAVNLVESYIFSNPHGDPAKFLIEELVEKAANSAGFSTEELMNIPAGRRRKYHDDVTVMVIILGMNKRTSKASICI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3871 489 Gene3D - 106 485 IPR036457 -
Mal4g3871 489 CDD PP2Cc 149 476 IPR001932 -
Mal4g3871 489 SUPERFAMILY PP2C-like 148 477 IPR036457 -
Mal4g3871 489 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 203 - -
Mal4g3871 489 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 213 488 - -
Mal4g3871 489 PANTHER PROTEIN PHOSPHATASE 2C 2 203 IPR015655 GO:0004722|GO:0006470
Mal4g3871 489 PANTHER PROTEIN PHOSPHATASE 2C 213 488 IPR015655 GO:0004722|GO:0006470
Mal4g3871 489 ProSiteProfiles PPM-type phosphatase domain profile. 136 476 IPR001932 -
Mal4g3871 489 SMART PP2C_4 127 474 IPR001932 -
Mal4g3871 489 Pfam Protein phosphatase 2C 219 445 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3871 Mal-Chr4 112692066 112693993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3871 4 489 PP2C-type Phosphatase Gene Family AT3G16560 66.260 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3871 - - gmx:100791404 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4831 5 121529675 121531536 Mal4g3871 4 112692066 112693993 PCT