Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3857 ATGAAAGGGATTTCCTACCTCATCCACAATCTTGGGTTTGACCCACAATCTGCTTCCAAACTCTGCTCCACATACAATGTTCGTTTCAAGACTGCTCAAAAACCTGATTCTGTTCTCAACTTCTTTAGAGACCATGGTTTCTCAGATTCCCAACTATGTGATATCATTCGGAAGGCACCGTCACTTCTTTCCTGCAATCCCTCCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAAATCTGACATTGTTAACCTTGTCAGTAAGAGCCCTGGAGTCCTTTGTGCAAGCCTCAACAATCAAATGCTACCAACCTATGAATTGGTTTATAGATTATTGAAATCTCATGAGGACACCATTGCTTGTGCACTTCACAATCCAAGATTCTTTGGAGCCACACGTGTGTCAAATAACATCAGGTTGTTAATTGAGAGTGGAGTGGCCGACTCAAACATCACAAGATTGCTTCGCAACTGGAGTCCGATATTCCATACACAACATATGCTGAAATTGGTGGAGGAATTAAAGGATATGGGTTTTAATCCTTTAAAAACATCTTTTGGTGTAGCATTGAGAGCCAAAATATCAGTAAATAAAACCTTGTGGAGACAGAAAGTTGATACCTTTAAGAAGTGGGGTTGGTCTGATGAAGACGTTCTTGAAGCATTTAGAAAGCAGCCTTATTGTATGCTAACATCTGTTAATAAAATAAATTTAGTGATGAGCTTTTGGGTCAATCAATTGGGTTGGGATTCTCTGGCCATTGCCGAAACACCTAATATTTTGTTGTCAAGTTTGGAAAGAAGGATCATTCCGAGGGCCGCTGTTGTGCAATTTCTTTGGAGTAAAGGTTTGAGAAATACGAATGCAAGCTTAACTTCTCCATTTGTAGTGCAGGAGAAGTTGTTTCTTGATATGTTTATAAAACGTTTTAAGATGGACTCTTCTTATCTACTAAAACTGGCAAGTTTAGCTTTGCTTACTTTGGCAAATGTTGGCTTTGCTCTGATTGACATTTCTTCAAAATCCTATTGTTTATCAGTTTAA 1062 0.3861 MKGISYLIHNLGFDPQSASKLCSTYNVRFKTAQKPDSVLNFFRDHGFSDSQLCDIIRKAPSLLSCNPSKRVLPKFQFFLSKGASKSDIVNLVSKSPGVLCASLNNQMLPTYELVYRLLKSHEDTIACALHNPRFFGATRVSNNIRLLIESGVADSNITRLLRNWSPIFHTQHMLKLVEELKDMGFNPLKTSFGVALRAKISVNKTLWRQKVDTFKKWGWSDEDVLEAFRKQPYCMLTSVNKINLVMSFWVNQLGWDSLAIAETPNILLSSLERRIIPRAAVVQFLWSKGLRNTNASLTSPFVVQEKLFLDMFIKRFKMDSSYLLKLASLALLTLANVGFALIDISSKSYCLSV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3857 353 PANTHER CGI-12 PROTEIN-RELATED 4 328 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 4 328 - -
Mal4g3857 353 Pfam mTERF 201 308 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 Pfam mTERF 39 185 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 SMART mt_12 225 256 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 SMART mt_12 257 291 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 SMART mt_12 158 186 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 SMART mt_12 53 84 IPR003690 GO:0003690|GO:0006355
Mal4g3857 353 Gene3D Transcription termination factor 3, mitochondrial 104 319 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3857 Mal-Chr4 112421702 112423200 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3857 mTERF 3.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3857 K15032 - gmx:102663414 355.14