Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3856 ATGTTGACGAATAATATATTATGGCGTCACAGAACAACCCGTCTTTACCTCAACAAACCCTTAAACCCTAACCCTCTTTTCCACCATTCCCCATTATTACCCTTTTCTCTGCATTTTTCCACCAACACTTCAGATTCAACCTTATTTCCTGTGTCCTACCTCATCAACAATCTTGGGTTTGACCCACAATCTGCTTCCAAACTCTGCTCCACTTACAAGCTCCGTTTTGAGACCAACCAAAAACCTGATTCAGTTCTCAACTTCTTTAGAAACCATGGTTTCTCTGATTCCCAATTACGCGATACCATTGCCAAGTCACCATGGTTACTTTCCTGCGACCCCTCCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTTTCTCCAAAGGTGCTTCTACCTCTGACATTGTGAAAATTGTCAGTAAGAACCCCAACATCCTGAAAGTAAGCCTGAACAATCAAATTATCCAAGCCTATGATTTGGTTTATAGATTCTTGCAATCTCACGAGGACACTATTGCTTGTTCGATTCACAATCCAGCGATATTTACTGTCCATCTTGTGTCACATAACATCACATTGTTGGTTGAGAATGGAGTGGCCGACTCAAACATTAGAATATTGCTTCGGTACTGGAGTCGGGCATTTCAGACACATGACATGCTGAAGTTGGTGGAAGAATTAAAGGATTTGGGCTTTAATCCTTCAAAAACAACTTTTGGTGTAGCATTGAGAGCCAAATTATCAGTAAACAAAACCTTGTGGAAACAGAAAGTTGATACCTTTAAGAAGTGGGGTTGGTCTGATGAAGATGTTCTTCAAGCATTTAGAAAGCAGCCTTATTGTATGCTAACATCCGTTGATAAAATTAATTTAGTGATGAGCTTTTGGGTCAATAAGTTGGGTTGGGATGCTACGGCCATTGCCAAATCACCAAGTATTTTGTTGTTAAGTTTGGAAAAAAGGATCATTCCAAGGGCCGCTGTTGTGCAATATCTTCTGAGTAAAGGTTTGAGAGATAAGAATGCAAGCTTAACTACTCCATTTGCAGTGCAGGAGAATTTGTTTCTTGATATGTTTATAAAACGTTTTAAGATGGAGTCTTCTTCTCTACTAAAACTGTATGAAGAAAAACTCAATCTTGCATACACCGGGACAAAACTTGCATGTCATGATTAG 1176 0.392 MLTNNILWRHRTTRLYLNKPLNPNPLFHHSPLLPFSLHFSTNTSDSTLFPVSYLINNLGFDPQSASKLCSTYKLRFETNQKPDSVLNFFRNHGFSDSQLRDTIAKSPWLLSCDPSKRVLPKFQFFFSKGASTSDIVKIVSKNPNILKVSLNNQIIQAYDLVYRFLQSHEDTIACSIHNPAIFTVHLVSHNITLLVENGVADSNIRILLRYWSRAFQTHDMLKLVEELKDLGFNPSKTTFGVALRAKLSVNKTLWKQKVDTFKKWGWSDEDVLQAFRKQPYCMLTSVDKINLVMSFWVNKLGWDATAIAKSPSILLLSLEKRIIPRAAVVQYLLSKGLRDKNASLTTPFAVQENLFLDMFIKRFKMESSSLLKLYEEKLNLAYTGTKLACHD* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3856 391 PANTHER CGI-12 PROTEIN-RELATED 19 383 IPR003690 GO:0003690|GO:0006355
Mal4g3856 391 Pfam mTERF 86 213 IPR003690 GO:0003690|GO:0006355
Mal4g3856 391 Pfam mTERF 248 355 IPR003690 GO:0003690|GO:0006355
Mal4g3856 391 Gene3D Transcription termination factor 3, mitochondrial 169 368 IPR038538 -
Mal4g3856 391 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 383 - -
Mal4g3856 391 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Mal4g3856 391 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Mal4g3856 391 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Mal4g3856 391 SMART mt_12 136 171 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3856 Mal-Chr4 112417045 112418220 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3856 mTERF 6.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3856 K15032 - gmx:102663414 384.03