Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3852 ATGAAAATTCTCATTTTTATCTTGTTTTTTGTACCATATTGTGCACTTGCCTTTGATACAAAAACGGTCATAGACTCTCATATGTTAACGCAAAAGGTAGGAACTAATCGCACTATCAAAGTTGATGTCAATGGAAATGGAGACTTCAAATCAGTCCAAGCTGCCATTGATTCAATTCCTGAAGGAAATTCTAATTGGGTCATCGTTCATATTAGAAAAGGAGTATATAGAGAAAAAGTGCACATACCAAAGAATAAGCGTTATATATTCATGAGAGGGAATGGAAGAGGAAGAACTGCCATTGTTTGGTCTGAAAGCTCCTCTGACAACATAGCTTCTGCCACCTTCAAAGTTGAAGCCTCTGATTTCATTGCCTTTGGAATTAGCTTCAAGAATGATGCACCTACAGGGATAGCATATACTTCACAAAATCAATCTGTGGCAGCATTTGTGGCAGCAGAAAAAGTGGCATTTTATCACTGTGCATTTTACAGTACACACAACACACTCTTTGATTACAAAGGTAGACATTACTATGAGTCATGCTACATTCAAGGCTCCATTGATTTCATATTTGGACGTGGGAGAACCATCTTCCAAAGTTGTGAGATATTTGTGGTTGATGACAAAAGGATAAAAATTCGTGGATCAGTTACAGCTGCAAACAGAGAAAATGAAAGTGAGATGAGTGGATTTATATTTATCAAAGGCAAAGTTTATGGCATTGGTGGTGTGTACTTAGGAAGAGCTAAAGGTCCTTATTCTAGGGTTATTTTTGCTAAAACATATCTCTCCAAGACCATTGTCCCAGAAGGATGGACCAATTGGAGTTATGATGGTAGCACTGAACATCTTTACCATGCGGAGTATCAATGCCATGGACCTGGAGCAACAACAGAGGGAAGAGCTTCTTGGTCAAGGCAACTTAGTGATGAAGAAGCTGCTCCATTTATATCGATTAATTACATTGATGGCAAGAATTGGTTACCAGCGTGGACATAA 1002 0.3842 MKILIFILFFVPYCALAFDTKTVIDSHMLTQKVGTNRTIKVDVNGNGDFKSVQAAIDSIPEGNSNWVIVHIRKGVYREKVHIPKNKRYIFMRGNGRGRTAIVWSESSSDNIASATFKVEASDFIAFGISFKNDAPTGIAYTSQNQSVAAFVAAEKVAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRTIFQSCEIFVVDDKRIKIRGSVTAANRENESEMSGFIFIKGKVYGIGGVYLGRAKGPYSRVIFAKTYLSKTIVPEGWTNWSYDGSTEHLYHAEYQCHGPGATTEGRASWSRQLSDEEAAPFISINYIDGKNWLPAWT* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3852 333 Gene3D - 33 333 IPR012334 -
Mal4g3852 333 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Mal4g3852 333 SUPERFAMILY Pectin lyase-like 35 331 IPR011050 -
Mal4g3852 333 Pfam Pectinesterase 40 325 IPR000070 GO:0030599|GO:0042545
Mal4g3852 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 332 - -
Mal4g3852 333 PANTHER PECTINESTERASE 67-RELATED 5 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3852 Mal-Chr4 112381804 112383351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3852 4 329 Carbohydrate Esterase AT5G47500 37.278 8.34e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3852 - - mtr:MTR_2g033970 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3852 4 112381804 112383351 Mal4g3852 4 112381804 112383351 ECH