Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3851 ATGTTGAAGTGGCGCCACAGAACCACCCTAATCTATGATCTCAAGGGCTTCATTTCCCCACAAAAATCATCATCCCCAAACCCTAACCCTAACCCTCTTTTCCAACATTACCCTTCTCTGCAATTCTCCACCAACACTCCCGATTCACACTCATTTGCAGCTTCCTACCTCATTCACAATTTTGGGTTTTCCCCACAATTTGCTTCCAAACTCTGCTCCACTTACAATGTTCGTTTCAAAACTCCCCAAAACCCCGACTCTGTTCTCAACTTCTTCAGAGACCATGGTTTCTCTCATTCCCAACTTCGTCATATCATTGCCAAGGTACCAGGGCTACTTTCCTGCGACCCCTCCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTACCTCTGACATTGTTAACCTTCTCAGTAAGAACCCTAAAGTCTTGTCTGTAAGCCTCAAGAATCGTATAGTTCCGATTTATGAATTGGTTTATAGATTCTTGCAATCTCACAACGACACTATTGCTTGTGCAACTCACAGTCCAATTTTACTATGTGACGATCGTGTGCAACATAACATCACATTGTTGGTTCAGAATGGAGTGGTTGACTCAAGCATTAAAAGATTGCTTCAGTCCCGGATCCAGAGTCTGACAATCCACACACGTGACATAGCGAAGTTAGTGGAGGAGTTAAAGGATTTGGGGTTTCATCCTTCAAAATCAACTTTTGGTGTAGCATGGCATGCCAAAACAACAGTAAGCAAAACATTGTGGAAAGAGAAAGTTGATGTCTTTAAGAAGTGGGGTTGGTCTGATGAAGATGTTCTACAAGCATTTAGAAGACAGCCTTATTGTATGTTAACATCCATTGATAAAATTAATTCAGTGATGAGTTTTTGGGTCAATCAGTTGGGTTGGGATGCACTTGCCCTTGCCAATGGACCATCCGTTTTTTTGTTAAGTTTGGGAAAAAGGATCATTCCGAGGGCCCATGTATTGCAATTTTTGCTGAACAACGGTTTACGAAAAAAGGATGCCAGCCTAACTTGTCCGTTTATAATATCCGATAAGTTGTTTATTGAAACGTTTATAAAACGATTTGAGAGGGAGTCTTCCAGTTTGTTAAAGTTGTATGAGGAAAATCTCAATCTTTCATACACCACGGACAAAAATTGCATGTGA 1185 0.4093 MLKWRHRTTLIYDLKGFISPQKSSSPNPNPNPLFQHYPSLQFSTNTPDSHSFAASYLIHNFGFSPQFASKLCSTYNVRFKTPQNPDSVLNFFRDHGFSHSQLRHIIAKVPGLLSCDPSKRVLPKFQFFLSKGASTSDIVNLLSKNPKVLSVSLKNRIVPIYELVYRFLQSHNDTIACATHSPILLCDDRVQHNITLLVQNGVVDSSIKRLLQSRIQSLTIHTRDIAKLVEELKDLGFHPSKSTFGVAWHAKTTVSKTLWKEKVDVFKKWGWSDEDVLQAFRRQPYCMLTSIDKINSVMSFWVNQLGWDALALANGPSVFLLSLGKRIIPRAHVLQFLLNNGLRKKDASLTCPFIISDKLFIETFIKRFERESSSLLKLYEENLNLSYTTDKNCM* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3851 394 Gene3D Transcription termination factor 3, mitochondrial 164 374 IPR038538 -
Mal4g3851 394 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 23 387 - -
Mal4g3851 394 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Mal4g3851 394 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Mal4g3851 394 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Mal4g3851 394 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Mal4g3851 394 SMART mt_12 139 174 IPR003690 GO:0003690|GO:0006355
Mal4g3851 394 Pfam mTERF 89 238 IPR003690 GO:0003690|GO:0006355
Mal4g3851 394 Pfam mTERF 255 360 IPR003690 GO:0003690|GO:0006355
Mal4g3851 394 PANTHER CGI-12 PROTEIN-RELATED 23 387 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3851 Mal-Chr4 112376090 112377274 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3851 mTERF 2.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3851 K15032 - gmx:102663414 384.8