Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3849 ATGTTGAATATCCATAGCCACAGATCCTTTCTCTACCCCAAGCTCTTAACTTTCCCAAAAACCCCAAAAAAACCATTACCCTTTTCCCGCTATTTCTGTTCAGATTCAACCCCTTTTGCAGTTTCCTACCTCATCCACAATCTTGGGTTTGACCCACAATCTGCTTCCAAACTCTGCTCCACTTACAAGCTCCGTTTCAAGACTGCTCAAAAACCTGATTCTGTTCTCAACTTCTTTAGAGACCATGGTTTCTCAGATTCCCAACTATATGATATCATTCGGAAGGCACCGTCACTTCTTTCCTGCAATCCCTCCAAAAGGGTTTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCCTCTAAATCTGACATTGTTAACCTTGTCAGTAAGAGTCCTGCAGTCCTTTCTGCAAGCCTCAATAATCAAATGGTACAAAACTATGATTTGGCCTATAGATTCTTGCAATCTCACGAGGACACTATTTCTTGTGCACTTCACAGTGCAACTTTCTTTGGAGCCACTTGTGTGTCAAATAACATCAGGTTGTTGATTGAGAATGGAGTGGCAGACTCAAACATCACAAGATTGCTTCGGACCCGGAGTCCGATATTCTATACACGAGACATGCTGAAATTGGTCGAGGAATTAAAGGATTTGGGCTTTAATCCTTCAAAAACAACTTTCGCTATAGCATTGCTTGCCAAAACAACTATAAACAAAACCCTATGGAAAGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGAAGAAGTTGTTTCGGAAGCATTTAGAAGGCGGCCTGACTGTATGTTAGTATCCATTCATAAATTAAATTTAATTATGGATTTTTGGGTCAATCAGTTGGGTTGGGATGCTCTTGCCATTGCTGCAGATCCATCAGTTTTTGCTATGAGTATGGAAAAAAGAATCATTCCAAGGGCCCCAATAGTGCAATTCCTGCTAAAGAAAGGTCTGCGAAAAAGGAATGCTAGCTTAACTTGTCCATTTGTTGTGCCTGAGAAGTTGTTTCTTGATATGTTTGTAAAACGTTTCGAGAATGAGTCTTCTTATCTGCTAAATTTGTATGAGGAAAAACTCAATCTTGCTTACACCACTGACAAAACTTGCACGCCATGA 1143 0.4016 MLNIHSHRSFLYPKLLTFPKTPKKPLPFSRYFCSDSTPFAVSYLIHNLGFDPQSASKLCSTYKLRFKTAQKPDSVLNFFRDHGFSDSQLYDIIRKAPSLLSCNPSKRVLPKFQFFLSKGASKSDIVNLVSKSPAVLSASLNNQMVQNYDLAYRFLQSHEDTISCALHSATFFGATCVSNNIRLLIENGVADSNITRLLRTRSPIFYTRDMLKLVEELKDLGFNPSKTTFAIALLAKTTINKTLWKEKVDTFKKWGWSEEVVSEAFRRRPDCMLVSIHKLNLIMDFWVNQLGWDALAIAADPSVFAMSMEKRIIPRAPIVQFLLKKGLRKRNASLTCPFVVPEKLFLDMFVKRFENESSYLLNLYEEKLNLAYTTDKTCTP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3849 380 Pfam mTERF 243 337 IPR003690 GO:0003690|GO:0006355
Mal4g3849 380 Pfam mTERF 76 223 IPR003690 GO:0003690|GO:0006355
Mal4g3849 380 SMART mt_12 195 223 IPR003690 GO:0003690|GO:0006355
Mal4g3849 380 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Mal4g3849 380 SMART mt_12 294 328 IPR003690 GO:0003690|GO:0006355
Mal4g3849 380 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Mal4g3849 380 SMART mt_12 126 161 IPR003690 GO:0003690|GO:0006355
Mal4g3849 380 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 372 - -
Mal4g3849 380 Gene3D Transcription termination factor 3, mitochondrial 152 357 IPR038538 -
Mal4g3849 380 PANTHER CGI-12 PROTEIN-RELATED 30 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3849 Mal-Chr4 112350198 112351340 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3849 mTERF 1.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3849 K15032 - gmx:102663414 385.185