Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3848 ATGCTTCGTTTCATCATCTTCACTCACCACCATTACAGAGCAATTAATCCCCACAAATCCACCCCTCTTTTCCCATTCCAATTTTCCCCCAAATTCAATCTCTGCACCACAACTTCAGATTCAGATTCTGATTCAAACTCATTCACCGTCTCTTACCTCATCAACACCATCGGTTTCACTCGTGAAGCAGCTCTCAAAGCTTCAAAACGGGTTCGTTTCAACTCCCCAGAAAAACCCAATTCAGTTTTCACTTTCTTCAGAAACCTCGGTTTTTCAGATTCCAACATACGCATCATCATGATTAAAGAACCTTGGCTTCTTTCTTCAGATGCCCACAATTCAATTCTTCCAAAGTTTCAATTTTTTCTATCAAAAGGTGCTTCACCTTCTGAAATCGTGCGTTTGTTAACGGTGAGCCCTAGAATTTTACAGAGTAGTTTGGAGAATAGGATTATCCCTCTTTTTGAATTTTATAAGAGGTTTTTGAAATTCGATAAAGATACTATTTGTTGTATGATTCGGAATTCGATCTCTTTGTCTTACAATCTTACTATTGTTAATGTTAAGTTATTGATTGATTATGGAGTTTGTGATTCCAGCATTGCTAGATTGCTTTTGACAAGACCAACTATACTTGGATCAAATGATTTGATTCATACTTTGGAGGAAAAATGTATGAGTAAAACACTTTGGGATGAGAAAGTTGATGTTTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTTTTCAAGCATTTAGGTTGCAGCCTAGTTTTATGTTGACTTCAGTTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAATTGGGTTGGAATTTCTTGGCACTTACTAAAAGGCCGCAAATGTTCGGTTTTAGTTTGCAGAAAAGGATTGTTCCAAGGGCGTTGGTTCTTCAATATCTTGTGATGAAAGGTTTGAGGAAAAAGAATGCGAGCTTAGTTGCACCGTTTTGTTGGCCTGAGGAAATGTTCCTGAGCAAATATGTTCTCTGTTTTAAGGAGGAGTCTGATTATTTATTAAAGTTGTATGAGGACAAAATGAATCTTCCATACACCAAGGAGAACATTGACATGCCATTCACTAATTAG 1113 0.3684 MLRFIIFTHHHYRAINPHKSTPLFPFQFSPKFNLCTTTSDSDSDSNSFTVSYLINTIGFTREAALKASKRVRFNSPEKPNSVFTFFRNLGFSDSNIRIIMIKEPWLLSSDAHNSILPKFQFFLSKGASPSEIVRLLTVSPRILQSSLENRIIPLFEFYKRFLKFDKDTICCMIRNSISLSYNLTIVNVKLLIDYGVCDSSIARLLLTRPTILGSNDLIHTLEEKCMSKTLWDEKVDVFKKWGWSDEDVFQAFRLQPSFMLTSVDKINLVMSFWVNQLGWNFLALTKRPQMFGFSLQKRIVPRALVLQYLVMKGLRKKNASLVAPFCWPEEMFLSKYVLCFKEESDYLLKLYEDKMNLPYTKENIDMPFTN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3848 370 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 23 223 - -
Mal4g3848 370 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 223 360 - -
Mal4g3848 370 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 SMART mt_12 281 315 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 SMART mt_12 133 165 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 SMART mt_12 202 244 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 PANTHER CGI-12 PROTEIN-RELATED 23 223 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 PANTHER CGI-12 PROTEIN-RELATED 223 360 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 Pfam mTERF 228 332 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 Pfam mTERF 85 266 IPR003690 GO:0003690|GO:0006355
Mal4g3848 370 Gene3D Transcription termination factor 3, mitochondrial 54 221 IPR038538 -
Mal4g3848 370 Gene3D Transcription termination factor 3, mitochondrial 222 349 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3848 Mal-Chr4 112346063 112347228 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3848 mTERF 3.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3848 K15032 - gmx:102667698 318.161