Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3847 ATGTTGAAGAAACGGTTTCTCTCCCAGAGTGTTGTTTTAGGTATCATCACAACAACCTCAAAATTCAACAACCCTCTTCTTCAACGCTTTTCGTTCACAAGGTTCTGCACCACAACAACACACCCATTCGCTGTATCCTACCTCATCAACAATTTCGGTTTCTCATCTGAATCTGCTCTCAAAGCTTTCAACCAAAGACAGGTTCTTTTCAAATCCGCAGAAAATCCTAATTCAGTTATCCATTTCTTCAAAATCCGTGATTTTTCACATTCTGACATACGAATCATCATTAGAAAAGCACCATGGTTACTTTCAGCACAACCCCACAATGCAATTTTGCCAAAGTTTCAATTTTTTATATCCAAAGGTGCTTCTTCCTCTGATATTGTTTCTTTTATAACTGCAAACCCTAGAATTTTACAAACTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTGTTTAGTAGGTTTTTGAAAACCAACAAGGATATCATTGTTTGCTTACTTCGACATTCGACCTATGTTACTTTTAATCCCTATCACCTTATTGTGGCGAATATCAATTTGATGACTGATTTTGGAGTTTGTGATTCCACCATTGCTAGATTGCTTCAGAAAAGACCGTCTATATTTGGTTCAACCGATTTGATTAAGTCATTGGAGGAAGTTAAGCGTTTAGGATTTGATCCTTCAGTGGCTACTTTTGCGGCTGCTTTGATCGCCAAGAAATGTATGAGTAAAACACGTTGGGATGAGAAAGTTAATGTCTTTAAGAAATGGGGTTGGTCCAATGAAGCTTTTTTTCAAGCGTTTAGGTTGCATCCTAGTTTGATGTTGGCTTCAATTGATAAGATTAATTTTGTGATGCATTTTTGGGTCAACCAATTAGGTTGGGATTCCTTGGAACTTACTAAATGTCCACATATGTTTGGTTATAGTTTACATCAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATTTATTTTGATGAAAGGTTTGCGAGAAAAGACTGCAAGCTTAGTTACACCATTTACTTATTCTGAGAAATTGTTCTTGACCAAGTTTGTCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGTGGAAAAAATTAAACCTGCATACACAAAGGAGAACAATGGCATGCCATTCACTAATTAG 1167 0.3642 MLKKRFLSQSVVLGIITTTSKFNNPLLQRFSFTRFCTTTTHPFAVSYLINNFGFSSESALKAFNQRQVLFKSAENPNSVIHFFKIRDFSHSDIRIIIRKAPWLLSAQPHNAILPKFQFFISKGASSSDIVSFITANPRILQTSLEKRIIPLFELFSRFLKTNKDIIVCLLRHSTYVTFNPYHLIVANINLMTDFGVCDSTIARLLQKRPSIFGSTDLIKSLEEVKRLGFDPSVATFAAALIAKKCMSKTRWDEKVNVFKKWGWSNEAFFQAFRLHPSLMLASIDKINFVMHFWVNQLGWDSLELTKCPHMFGYSLHQRIIPRASVLQFILMKGLREKTASLVTPFTYSEKLFLTKFVFKEESDYLLKLYVEKIKPAYTKENNGMPFTN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3847 388 Gene3D Transcription termination factor 3, mitochondrial 140 366 IPR038538 -
Mal4g3847 388 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Mal4g3847 388 SMART mt_12 202 230 IPR003690 GO:0003690|GO:0006355
Mal4g3847 388 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Mal4g3847 388 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Mal4g3847 388 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Mal4g3847 388 PANTHER CGI-12 PROTEIN-RELATED 24 378 IPR003690 GO:0003690|GO:0006355
Mal4g3847 388 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 24 378 - -
Mal4g3847 388 Pfam mTERF 86 265 IPR003690 GO:0003690|GO:0006355
Mal4g3847 388 Pfam mTERF 186 352 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3847 Mal-Chr4 112339345 112340511 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3847 mTERF 1.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3847 K15032 - gmx:102663414 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4818 5 121375872 121377038 Mal4g3847 4 112339345 112340511 PCT