Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3846 ATGTTCAAAGCTTTCCTCTGCCGCAATGCATTTACCATGTCAAAAACAACACTCTACCACTCACCCTTCCAATTTTCACTCATCAAATTCCTCACCACTGCCCCTTCACCTTCACACTCATTCGCCGTATCCTACCTCATCCACAAATTCGGATTCTCACCTCAATTTTCACTCAGAGCTTCCAAAAAGCTTCGTTTCAAAACCTCACAAAAACCAGATTCAGTTATCAACTTCTTCAAAATTCACGGTTTCACCGACTCAGACATACACAGAATCATCAAAAGAGAACCATGGCTTCTTTCCTGCAATACCCACAAAATCATTCTCCCAAAGTTTCAATTTTTAATCTCCAAAGGCGCTTCTACCTCTGACATTATTCGTATGGTTGGAGTTTGCCCTAAGTTCTTGGGATCAAGCTTGAAGAATCATCAAATTATGTTTGATTTTTTTCTATCCAAAGGTGCTTCTTCCTCTGATATTGTTTCATTGTTAACTAAAAACACTAGAATTTTACAAACTAGTTTGGAGAAACGAATAATCCCTCTTTTTGAATTGTTAAGTAAGTTCTTTAAAACCAACAAGGATACCATGGTTTTCTTAATTCGACATTCGATTGCATTTACTATGATCCCCTATCACCTTATCGTGGCTAACATCAATTTGATGACTGATTTTGGAGTTTGTGATTCTGCCATTGCTAGATTGCTTCAGAAAAGGCCATCAATATTTGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAACAATTACTTTTGGGACTGCTTTGGTGGCCAAGAAATGTATGAGTAAAACACTTTGGGATGAGAAAGTAGATGTATTTAAGAAATGGGGTTGGTCTGATGAAGTTGTTATTCTAGCATTTAGGAGTCATCCTGATATTATGTTGACTTCCATTGAAAAGATTAATTTGGTGATGAATTTTTGGGTAAATCAATTGGATTGGAATTCCTTGGCACTTACCAAACTGCCAAATATGTTTTCTTATAGTTTGGAGAAAAGGATAATTCCAAGGGCCTCAGTTATGAAATTTCTTTTGATGAAAGGTTTGCGAGAAAAGAATGCAAGCTTAGTTGCACCATTTTCTTATTCTGAGAAAATGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGAAACTTGCATACACAATGGAAAACAATGGTGTGCCATTCACTAAATAG 1266 0.3626 MFKAFLCRNAFTMSKTTLYHSPFQFSLIKFLTTAPSPSHSFAVSYLIHKFGFSPQFSLRASKKLRFKTSQKPDSVINFFKIHGFTDSDIHRIIKREPWLLSCNTHKIILPKFQFLISKGASTSDIIRMVGVCPKFLGSSLKNHQIMFDFFLSKGASSSDIVSLLTKNTRILQTSLEKRIIPLFELLSKFFKTNKDTMVFLIRHSIAFTMIPYHLIVANINLMTDFGVCDSAIARLLQKRPSIFGSTDLIKSLEEVKGLGFDPSTITFGTALVAKKCMSKTLWDEKVDVFKKWGWSDEVVILAFRSHPDIMLTSIEKINLVMNFWVNQLDWNSLALTKLPNMFSYSLEKRIIPRASVMKFLLMKGLREKNASLVAPFSYSEKMFLSKFVFSFKEESDYLLKLYEEKMKLAYTMENNGVPFTK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3846 421 PANTHER CGI-12 PROTEIN-RELATED 147 411 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 PANTHER CGI-12 PROTEIN-RELATED 13 144 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 Pfam mTERF 76 383 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 Gene3D Transcription termination factor 3, mitochondrial 50 145 IPR038538 -
Mal4g3846 421 Gene3D Transcription termination factor 3, mitochondrial 146 400 IPR038538 -
Mal4g3846 421 SMART mt_12 126 156 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 SMART mt_12 332 366 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 SMART mt_12 233 261 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Mal4g3846 421 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 147 411 - -
Mal4g3846 421 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 13 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3846 Mal-Chr4 112326626 112327891 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3846 mTERF 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3846 K15032 - gmx:102663414 331.257