Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3843 ATGTTGAAAGCGTTTCTCAACCACAATGCATTTTCCATATCAAAAACCTCAACAACACTTTACCACTCACCCTTCCAATTTTCACTCATCAAATTCCTCACTACAACCACCGCTTCAGATTCAAATTCAAATTCATTCGCCGTATCATACCTCATCGAAAAATTTGGATTCTCACCTGAATTCGCACTCAAAGCTTCTAAACAGGTTGGTTTCGAAACCTCACAAAAACCCGATTCAGTTCTCAACTTCTTCAAAAATCACGGTTTCACCGACTCAGACATACACAACATCATCAAAAGAGAACCATGGCTTCTTTCCTGCGATACCAACAAAAGAATTCTCCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTACCTCTGACATTGTTCGTATTGTTGTAGGTAACCCTAGATTCATGAGATCAAGTTTGAAGAATCGTGTTATCCCTGTTTATAATTTGGTAACTCAATTCCTTAAATCTGATCAAAAAGCTATTGCTTCTGTAATTTCATGTCCTTCTTTGATTTGCAGTGATTATATTGCTTCTAATATCAATTTCATGATTGATAATGGTGTTTGCAATACCAGCATTTATAGAATTCTTAGTACTAGACCTAATGTTATCTTTTGTGTTCCTAGAGCGTTAAGTGAGACTGTGGAAGATTTGAAAAATATGGGATTTGATCCTTCTAAATATAACTTTGGTGATGCATTGCTTGCTAGAATATGTTTAAGTAAATCCAAGTGGGATGAGAGAATTGATACGTTTAAGAAATGGGGTTGGTCGGAGGAAAGTGTTATGGAAGCTATTAGGAAGCAGCCGAAATGTATGTTGGTATCCAACGAAAAAATTAATAGGGTGATGAGTTTTTGGGTTAATGAGTTAGGTTGGGATTCTTCTCACCTTGTCAAGGGACCAGGGATGTTTTGTTATTGTTTGGAGAAAAGGATCATTCCAAGAGCTATGGTTGTTTTTTATCTTCTAACGAAGGGTTTGAGAAGCGAGTATGCCAGTTTGCTTTCTCCATTTTATTTGCCTGAGAAATTGTTTTTGGAAAGGTATGTGTTGTGTTTTGAAGAGGAGACTTCTCATCTACTGAAGTTATATCGTTCAATGATGAAGATGGGAGATAAGAAGGCAAGTAGCACAGAAGAATCATGA 1167 0.3668 MLKAFLNHNAFSISKTSTTLYHSPFQFSLIKFLTTTTASDSNSNSFAVSYLIEKFGFSPEFALKASKQVGFETSQKPDSVLNFFKNHGFTDSDIHNIIKREPWLLSCDTNKRILPKFQFLLSKGASTSDIVRIVVGNPRFMRSSLKNRVIPVYNLVTQFLKSDQKAIASVISCPSLICSDYIASNINFMIDNGVCNTSIYRILSTRPNVIFCVPRALSETVEDLKNMGFDPSKYNFGDALLARICLSKSKWDERIDTFKKWGWSEESVMEAIRKQPKCMLVSNEKINRVMSFWVNELGWDSSHLVKGPGMFCYCLEKRIIPRAMVVFYLLTKGLRSEYASLLSPFYLPEKLFLERYVLCFEEETSHLLKLYRSMMKMGDKKASSTEES* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3843 388 Gene3D Transcription termination factor 3, mitochondrial 177 370 IPR038538 -
Mal4g3843 388 Gene3D Transcription termination factor 3, mitochondrial 54 176 IPR038538 -
Mal4g3843 388 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 17 380 - -
Mal4g3843 388 Pfam mTERF 81 230 IPR003690 GO:0003690|GO:0006355
Mal4g3843 388 Pfam mTERF 244 340 IPR003690 GO:0003690|GO:0006355
Mal4g3843 388 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Mal4g3843 388 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Mal4g3843 388 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Mal4g3843 388 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Mal4g3843 388 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Mal4g3843 388 PANTHER CGI-12 PROTEIN-RELATED 17 380 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3843 Mal-Chr4 112259873 112261039 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3843 mTERF 5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3843 K15032 - gmx:102667698 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4814 5 121353349 121354527 Mal4g3843 4 112259873 112261039 PCT