Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3806 ATGGAGGAGGAGAAGAGAGAGGAGCACACAAACCCCACCAACTCATCATCCACCACCACCATGACATTTTCCGACGAGATTCCGAGCACCACCACCACCACCAACAACACATCTTTGTTCCCTTTTCAACCTTCAATCTCCACCTTTTTTGACTCCATGCCATCTTCCTCGTGTGACCAAAAAGCTTCTTCTTTTGGTTTCATGGACTTGTTGGGTTCCCACGATTACAACATCAACAACAACACTTTTTTATTACCAGATTGGGTTCCCATCGTTGCAACAACAACAACAACACACCATGCTCTTCAATCTCCGGCGAGTTCTAACATCCCGGACTCATCCGAGGTGTTGAACACTCCGGTATCGCCGAATTCTTATTCGATTTCTTCGTCATCTAATGAAGCCACGGTTAACAACACCATTGAACAACATAAAGGTAAACTTTCAAGAAACGTAAACGGAGCAGAGTTAGAAGGAGATGACCAAGATCAAGACAAGACTAAGAAACAATTGAAAGCAAAAAAGAAGAACCAAAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATAATCTAGATGATGGCTATAGGTGGCGTAAGTATGGCCAAAAAGCTGTGAAAAACAGTCCTTTTCCCAGGAGCTACTATCGTTGTACAATGGTAAGTTGTGGCGTGAAAAAGCGCGTGGAGCGTTCTTCTGATGATTCTTCCATTGTCGTTACTACTTACGAGGGTCAACATACACATCCTTCTCCTGCCACGTCACGTCCTAACCTCAGCTTCGTTCACCAATCTACTAGCTTCGGTTCATTTGGTGCTGCTTCGGGTTCACACTCACACTTTGTTCTACCAACATTGTTGTACAATAATAATAATAGTCCTAATAACAACAACAACTCCACTAGTAGTTCTACTAATACTATTACTATTACTACTAATACACCCCCTTCTTCTAATTATGTTGGTGGTTCTAGTGGTAGTTATGTTAACACGTCGTCTTTTGGTGGTTTTGTTCATGACCAAGGGATTAATCATCGAAGTTTTGGACATTCAGGGTTTGTTAATGAGGCTTTGTTAAGAGATAATGGGTTGCTTCAAGATATTATTCAGATGAAAAAAGAGGAGAAAGATTCAATCAAAGAACAACATTAG 1167 0.4113 MEEEKREEHTNPTNSSSTTTMTFSDEIPSTTTTTNNTSLFPFQPSISTFFDSMPSSSCDQKASSFGFMDLLGSHDYNINNNTFLLPDWVPIVATTTTTHHALQSPASSNIPDSSEVLNTPVSPNSYSISSSSNEATVNNTIEQHKGKLSRNVNGAELEGDDQDQDKTKKQLKAKKKNQKKEREPRFAFMTKSEVDNLDDGYRWRKYGQKAVKNSPFPRSYYRCTMVSCGVKKRVERSSDDSSIVVTTYEGQHTHPSPATSRPNLSFVHQSTSFGSFGAASGSHSHFVLPTLLYNNNNSPNNNNNSTSSSTNTITITTNTPPSSNYVGGSSGSYVNTSSFGGFVHDQGINHRSFGHSGFVNEALLRDNGLLQDIIQMKKEEKDSIKEQH* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3806 388 MobiDBLite consensus disorder prediction 12 38 - -
Mal4g3806 388 MobiDBLite consensus disorder prediction 102 183 - -
Mal4g3806 388 ProSiteProfiles WRKY domain profile. 192 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g3806 388 MobiDBLite consensus disorder prediction 1 38 - -
Mal4g3806 388 Pfam WRKY DNA -binding domain 198 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g3806 388 MobiDBLite consensus disorder prediction 102 147 - -
Mal4g3806 388 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 376 IPR044810 GO:0003700
Mal4g3806 388 SMART WRKY_cls 197 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal4g3806 388 SUPERFAMILY WRKY DNA-binding domain 189 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal4g3806 388 Coils Coil 374 388 - -
Mal4g3806 388 Gene3D WRKY domain 180 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal4g3806 388 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 62 376 - -
Mal4g3806 388 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3806 Mal-Chr4 111321525 111323197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3806 64 380 WRKY Transcription Factor Family AT2G47260 41.071 1.35e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal4g3806 WRKY 2.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3806 4 111321525 111323197 Mal5g4940 5 122952985 122954770 PCT