Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3753 ATGATGGCACAAAACAACTTAACAGGTCAGCTTGTTGGTTCAGAAATACATGGATTTCACACGTTGAGAGATCTGGATGTCGGCGAAACCTTGGAGGAAGCAAAAAGCAGATGGCTTCGTCCGAACGAGATTCATGCCATACTCAGCAATCATAAATATTTTACTATCCATGTCAAGCCATTGCATTTGCCCAAAAGTGGTACTGTTGTACTATTTGACCGCAAGATGCTAAGGAACTTTCGAAAAGATGGGCATAACTGGAAAAAGAAAAATGATGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAGAGGATCCACGTATACTATGCACACGGACAAGATAACCCAAGCTTTGTTCGAAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCACATAGTTCTTGTTCATTATCGTGAAACACAAGAGTCTCAAAGTTCACCTGTTACACCGTTAAATTCAAATTCAAGTTCTACTTTTGATCCAACTACACCTTGGATTCTATCAGAAGACTTAGATTCTGGAACCAACAATGCATATACTAATGGTCTCGATGGAAATTTAACAGTCAGAAGTCATGAACAGAAACTTCATGAGCTTAATACACTTGACTGGGATGAACTAGTGGCTTCTAATGTTAATACCCCTACTATACCTAATGGAGGCAACGAACCGGGTTTCTATCAACTAAATCAAAGCTTACTGAATGGCAGCTTTGACAATGTTGCCGGTAATCTTTCTGCAGAAATTCCAACGCCAGAGTCTGGGATTAGTAATGTTTCTTACAGTTTTCCAGAAAGTGTTAACCTTCAGAAGAATCAGCCTATCACTTTTGGTGGTGTTGATTCCATCGACACTTTAGTCAATGAAGGTTTGCAAAGTCAGAACAGCTTTGGAACGTGGATGAACAATGCCCTATCTTACACACCATGTTCTGTAGAGGCGTCTGCTCTTGAATCCTCAGTTCCTTCGTATGCTCATGATCCATTTTCATCACTGGTTATGGATAATCAACAATCTTCTCTTCCGGAGCAAGTATTTCATATTACTGAGGTGGCCCCTTCATGGGTTTCTTCCACTGAGAAAACAAAGGTCCTGTTAACTGGATATTTTCACAATGATTATCAACACCTTGCAAAGTCCAATATAATGTGCGTCTGTGGCGAAACAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGGTATTGCCGCATTCTCCTGGATTCGTAAATCTCTATTTGAGCTTCGATGGCCATAAGCCTATTAGCCAAGTTGTTAATTTTGAATATCGCATTCCTATTTTGCACGATCCTGCAGCTTCAATGGAAGAGACATACAACTGGATTGAATTTCGTCTTCAAATGAGGCTTTCTCATTTGCTTTTTACAACACCGAAGACCCTTGATGTTTTCTCTAGTGAAGTATCACCTAAGACCCTGAAAGAGACTAAAAAATTCGCGTCCAAAACATTATTTCTTTCCAAAAGTTTTCAACACTTTATGAAGTCGTCCGATGCAAACACACCTCCCTTTCCGCAAGCGAAAAATACCTTGTTCGAAATTGCATTGAAAAACAAACTAAGGGAATGGCTTTTGGAACGAATTGTTTTAGGATGTAAGACTAGTGAGTATGATGCACAAGGCCAAGGTGTAATTCATTTGTGTACAATGTTGGGATATACTTGGGCTATTACTTTGTTTTCGTGGTCAGGCTTGTCGCTGGATTTCCGCGACAAATTTGGATGGACAGCTCTTCATTGGGCCGCATATAATGGAATGGAGAAAATGGTTGCTACGCTGTTGTCTTGTGGAGCAAAGCCCAATTTGGTGACAGATCCAACTCCCCAAAACCCTGGTGGCTGTACTGCTGCTGATCTTGCTTATGCGAAGGGATATGATGGTTTAGCCGCTTATCTTTCAGAAAAGTGTCTGGTTGAGCAGTTTAATGATATGAGCTTAGCTGGAAATATCAGTGGTTCACTCCAAACCACCTCAACTGATCCAGTAAATGCTGAGAACCTTACCGAGGACCAAGTGTACCTAAAGGATACATTGGCAGCTTACCGAACAACAGCCGATGCAGCAGCACGTATACAAGCTGCATTTAGGGAGCACTCACTAAAATTGCGATATCAGTCTGTTCAATTTATCAGTCCAGAGGAGGAAGCACGCCAAATAGTAGCAGCAATGAAGATTCAACATGCCTTTCGTAACTTCGAGACAAGAAAAGCGATGGCAGCCGCTTCTCGGATCCAGTACAGATTCCGTTCATGGAGGTTGCGTAGAGAGTTTCTCCACATGCGACGTCAGGCTATTAAAATTCAAGCTGCATTTAGAGGCTTTCAAGAGCGTAGGCAATATCGTAAGATTCTATGGTCTGTTGGAGTTCTTGAGAAAGTAATCTTGCGTTGGCGTTTAAAGAAAAAAGGTTTCCGTGGGCTCGAGGTGAATCCCGACGAAGACATGAAAGATGAGAAGCAGGAAAGCGATGTAGAGGAGGACTTTTTTAGGACCGGTAGGAAACAAGCGGAAGAACGTGTTGAGAGATCTGTGGTACAAGTACAAGCCATGTTCCGTTCTAAGAAAGCGCAACAAGAGTATAGCAGGATGAAGATGGCACATAGTCAAGCAAAGTTGGAACTTGAATTAGAAGACCTTCTCAACTCTGAAGTGGACATGTAA 2712 0.4163 MMAQNNLTGQLVGSEIHGFHTLRDLDVGETLEEAKSRWLRPNEIHAILSNHKYFTIHVKPLHLPKSGTVVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPSFVRRCYWLLDKSLEHIVLVHYRETQESQSSPVTPLNSNSSSTFDPTTPWILSEDLDSGTNNAYTNGLDGNLTVRSHEQKLHELNTLDWDELVASNVNTPTIPNGGNEPGFYQLNQSLLNGSFDNVAGNLSAEIPTPESGISNVSYSFPESVNLQKNQPITFGGVDSIDTLVNEGLQSQNSFGTWMNNALSYTPCSVEASALESSVPSYAHDPFSSLVMDNQQSSLPEQVFHITEVAPSWVSSTEKTKVLLTGYFHNDYQHLAKSNIMCVCGETSVPVEIVQVGVYRCWVLPHSPGFVNLYLSFDGHKPISQVVNFEYRIPILHDPAASMEETYNWIEFRLQMRLSHLLFTTPKTLDVFSSEVSPKTLKETKKFASKTLFLSKSFQHFMKSSDANTPPFPQAKNTLFEIALKNKLREWLLERIVLGCKTSEYDAQGQGVIHLCTMLGYTWAITLFSWSGLSLDFRDKFGWTALHWAAYNGMEKMVATLLSCGAKPNLVTDPTPQNPGGCTAADLAYAKGYDGLAAYLSEKCLVEQFNDMSLAGNISGSLQTTSTDPVNAENLTEDQVYLKDTLAAYRTTADAAARIQAAFREHSLKLRYQSVQFISPEEEARQIVAAMKIQHAFRNFETRKAMAAASRIQYRFRSWRLRREFLHMRRQAIKIQAAFRGFQERRQYRKILWSVGVLEKVILRWRLKKKGFRGLEVNPDEDMKDEKQESDVEEDFFRTGRKQAEERVERSVVQVQAMFRSKKAQQEYSRMKMAHSQAKLELELEDLLNSEVDM* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3753 903 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 16 903 - -
Mal4g3753 903 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 16 903 - -
Mal4g3753 903 ProSiteProfiles IQ motif profile. 858 886 IPR000048 GO:0005515
Mal4g3753 903 ProSiteProfiles IQ motif profile. 777 801 IPR000048 GO:0005515
Mal4g3753 903 ProSiteProfiles IQ motif profile. 701 730 IPR000048 GO:0005515
Mal4g3753 903 SMART iq_5 734 756 IPR000048 GO:0005515
Mal4g3753 903 SMART iq_5 856 878 IPR000048 GO:0005515
Mal4g3753 903 SMART iq_5 700 722 IPR000048 GO:0005515
Mal4g3753 903 SMART iq_5 776 798 IPR000048 GO:0005515
Mal4g3753 903 ProSiteProfiles Ankyrin repeat region circular profile. 590 618 - -
Mal4g3753 903 SUPERFAMILY E set domains 355 441 IPR014756 -
Mal4g3753 903 Pfam IQ calmodulin-binding motif 779 798 IPR000048 GO:0005515
Mal4g3753 903 Gene3D - 753 801 - -
Mal4g3753 903 Gene3D - 522 658 IPR036770 -
Mal4g3753 903 ProSiteProfiles Ankyrin repeat profile. 590 622 IPR002110 GO:0005515
Mal4g3753 903 ProSiteProfiles CG-1 DNA-binding domain profile. 27 153 IPR005559 GO:0003677
Mal4g3753 903 Gene3D Immunoglobulins 348 443 IPR013783 -
Mal4g3753 903 Pfam CG-1 domain 33 146 IPR005559 GO:0003677
Mal4g3753 903 SMART ANK_2a 629 660 IPR002110 GO:0005515
Mal4g3753 903 SMART ANK_2a 590 619 IPR002110 GO:0005515
Mal4g3753 903 Pfam Ankyrin repeats (3 copies) 532 619 IPR002110 GO:0005515
Mal4g3753 903 SUPERFAMILY Ankyrin repeat 525 653 IPR036770 -
Mal4g3753 903 SMART CG_1_2 30 148 IPR005559 GO:0003677
Mal4g3753 903 ProSiteProfiles IQ motif profile. 754 783 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3753 Mal-Chr4 110179427 110187625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3753 31 896 CAMTA Transcription Factor Family AT3G16940 55.977 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mal4g3753 CG-1 1.6e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3753 K21596 - gmx:100819198 1384.78