Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3745 ATGGGAAGAGCTCCTTGTTGTGACAAAGTTGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAAGATAAGATCTTGACAGATTATATCAAACAAAATGGTGAAGGATCTTGGAGGTTTTTGCCTAAGAAAGCAGGTTTGTTGAGGTGTGGGAAGAGTTGTAGACTAAGATGGATCAACTATTTGAGAGCAGATGTGAAGAGAGGAAACATAGCTCCTCATGAGGAAGAAATCATTGTCAAGTTGCATGCTGTTCTTGGAAATAGGTGGTCTGTGATAGCATCACATTTACCGGGTCGAACAGATAATGAGATAAAGAACTACTGGAACTCTCATTTGAGAAGGAAAATCTACTGCTTCATGAGATCGATAAACGAGTCTCCGCCACCCCTTGACATGGCATCTACATCCAAAAATATTAATCAAGGGAAAATAAATAATCCAAACATAGAAGAAGACAATAGCATGGCTTTGACTCAAAATTCCCTTGAACCAATACCTAAAGAAAAAACAACTTCACAATACTATAATGCACAAGGAATTGAAGATATTTCAACTGTGAAGACATTTTATGAAATGGAGGGTAACATAAATAATGTAGTTGCATCATACCCCACCAAAAATGAATTAGATATTGATGATGGTTTGGGACCATATAAATGGCTAGATGATGAAATTATGAAACTTCGTAACATGTTTGTAAGTGGGATAGGTAAGTATAATTATGTAACAATTCATGAGAATGATGAGAAGGGTAATTATGAATTTGATACTAGAAAGATGCATGTGGAAATAATGGAAACAAATGAGGATGTGAAAAGTGGCATTTGTAGCTCATCATATAATGGAGAGAGTGGAGAAGGGTATATTTCTAATTCATCAGTGAATTCTGGCAAAGATTATGATCAATTGTCTGATTGGGACTTTTGTCAAGATGACCAAATGAAGACATGCTTGTGGGGTACAGGCATTGGTGAAATCATGAATGGTTTTTATCAGTAA 999 0.3624 MGRAPCCDKVGLKKGRWTAEEDKILTDYIKQNGEGSWRFLPKKAGLLRCGKSCRLRWINYLRADVKRGNIAPHEEEIIVKLHAVLGNRWSVIASHLPGRTDNEIKNYWNSHLRRKIYCFMRSINESPPPLDMASTSKNINQGKINNPNIEEDNSMALTQNSLEPIPKEKTTSQYYNAQGIEDISTVKTFYEMEGNINNVVASYPTKNELDIDDGLGPYKWLDDEIMKLRNMFVSGIGKYNYVTIHENDEKGNYEFDTRKMHVEIMETNEDVKSGICSSSYNGESGEGYISNSSVNSGKDYDQLSDWDFCQDDQMKTCLWGTGIGEIMNGFYQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3745 332 CDD SANT 72 112 IPR001005 -
Mal4g3745 332 CDD SANT 16 61 IPR001005 -
Mal4g3745 332 SMART sant 66 114 IPR001005 -
Mal4g3745 332 SMART sant 13 63 IPR001005 -
Mal4g3745 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal4g3745 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal4g3745 332 PANTHER MYB TRANSCRIPTION FACTOR 2 294 - -
Mal4g3745 332 Gene3D - 71 116 - -
Mal4g3745 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal4g3745 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal4g3745 332 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 294 - -
Mal4g3745 332 Pfam Myb-like DNA-binding domain 72 112 IPR001005 -
Mal4g3745 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal4g3745 332 Gene3D - 13 66 - -
Mal4g3745 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3745 Mal-Chr4 109984557 109987981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3745 1 326 MYB Transcription Factor Family AT5G49330 42.663 9.55e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g3745 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3745 K09422 - gmx:100819041 380.563