Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3731 ATGAAACTCAACAACAACAACAAAATTTCCATGCCAACCCCAACTTCCACTTCAACTTCAGCAACAAACTCCGGCAACCTCATCTCCGACCAGTTTCCGGCGGGTCTCCGTGTACTTGTTGTCGATGATGACCCCACTTGCCTCATGATCCTTGAAAGAATGCTCCGTTTTTGCCTCTACCAAGTTACAAAATGCAAGAGAGCTGAGGTTGCATTATCACTTCTTAGAGAGAACAAAAATGGGTTTGACATTGTTTTAAGCGACGTGCATATGCCGGACATGGATGGATTCAAACTTTTAGAACATATTGGATTGGAGATGGATCTTCCTGTTATTATGATGTCGGCTGATGATGGAAAAAACGTGGTAATGAAAGGTGTGACACATGGTGCTTGTGATTATCTAATCAAACCGGTGCGAATTGAGGCTTTGAAGAATATATGGCAGCATGTGGTTAGGAAGAGAAAGAATAGCTGGAAAGATATGAAGCAATCTGGTGGATTAGATGAAAGAGATCGAGAAAAAAAGGCGTCCAATGATGCTAATTACTCATCTTCAGCGAACGAGGGCAAGAGCTCAAAGAAGAGGAGGGATGAGGAAGACGAAGCAGATGAGAGGGATGATTGTTCCACGTCAAAGAAGCCACGAGTTGTTTGGTCTATTGAGCTTCATCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAAGGCTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCTGGGCTCACTAGAGAAAACGTTGCAAGCCATCTTCAGAAATACCGTTTGTATCTTCGAAGGTTGAGCGGAGTTTCCCAGCAGCAAAGTAACTTGAACAACTCCTTCATGAGTCCACAAGAGTCAATATTTGGAGCAACCTCAATAAATGAAATTGATCTTCAAACCTTTTCAGCTTCTGGCCAGCTCTCGGCGCAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTTATCAGTTCTGGAAACTCAAAACTAAGATTTGGAGAAGGGCAAATGCAACATATGAGCAGCAGTAAACCGATGAACTTTCTTCACGGAATCCCTACCAACATGGAGCCAAAGCAGTTTGCCAATTTTCACCAGTCTGCTCAGTCCTTTGGCAGCACGAATACGCGAGTCAATGCTTCTGCTGCAAAAAGAAACCCCTGGTTGATGCAGATGGTTCAGTCTCAACCAAGAGGTCAGATACTAAATGAGAATACCAATTCTCAAACTACAAGGTTTCCATCATCTTTGATGCAACCTACTGGACCAAATGGAATATCAGTCAATAGTTTCCCTCTTAGATGCTCTCCGGGTATATCCAGTAGCAGTACAAAAGGTGCATTTCAAGCGGAAGCTACTTCGGGAATTAAAGGATTAGGTGGATTTAGTTATGATGTTTATAATGATTTCCATCAGAAGTCCAATGATTGGGGCTTAGCTAATACAGGCCTGACATATGATGCTTCTCAACATGCAAATCCTTTACATGGTAACATTGATGTCTCGCCGTCGATTTTGGGCCATCGTGGTTTTTCCTCTATCCAACAGACTCGACAAAATAGAGATGGTATGAGTCAAGGTTATCTCCAAAATGTTGGTCAACACCTCAATACACCTTTTGTTGACAATTCATTAAGGGCTAAGAGTGAAAGAATTCCGGGTACAAACATCGAGATTAACCCTTTCTCTGATCAATTAAGTCAAGAGGATCTCATGAGTGCGTTTCTGAATCAGCATGAAGGCGTTGGACAAGTTGATAATGAGTTTGACCTTGATGGATATTCCATAGACAACATTCCAGTTTATAACAGATCCTGTTAG 1833 0.4201 MKLNNNNKISMPTPTSTSTSATNSGNLISDQFPAGLRVLVVDDDPTCLMILERMLRFCLYQVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNSWKDMKQSGGLDERDREKKASNDANYSSSANEGKSSKKRRDEEDEADERDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQSNLNNSFMSPQESIFGATSINEIDLQTFSASGQLSAQSLAKLQAAGLISSGNSKLRFGEGQMQHMSSSKPMNFLHGIPTNMEPKQFANFHQSAQSFGSTNTRVNASAAKRNPWLMQMVQSQPRGQILNENTNSQTTRFPSSLMQPTGPNGISVNSFPLRCSPGISSSSTKGAFQAEATSGIKGLGGFSYDVYNDFHQKSNDWGLANTGLTYDASQHANPLHGNIDVSPSILGHRGFSSIQQTRQNRDGMSQGYLQNVGQHLNTPFVDNSLRAKSERIPGTNIEINPFSDQLSQEDLMSAFLNQHEGVGQVDNEFDLDGYSIDNIPVYNRSC* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3731 610 MobiDBLite consensus disorder prediction 159 179 - -
Mal4g3731 610 MobiDBLite consensus disorder prediction 159 211 - -
Mal4g3731 610 Pfam Response regulator receiver domain 38 146 IPR001789 GO:0000160
Mal4g3731 610 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 214 267 IPR006447 GO:0003677
Mal4g3731 610 ProSiteProfiles Response regulatory domain profile. 37 152 IPR001789 GO:0000160
Mal4g3731 610 SUPERFAMILY CheY-like 35 159 IPR011006 -
Mal4g3731 610 MobiDBLite consensus disorder prediction 190 211 - -
Mal4g3731 610 SUPERFAMILY Homeodomain-like 211 271 IPR009057 -
Mal4g3731 610 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 431 - -
Mal4g3731 610 PANTHER TWO-COMPONENT RESPONSE REGULATOR 432 570 - -
Mal4g3731 610 MobiDBLite consensus disorder prediction 1 24 - -
Mal4g3731 610 Gene3D - 36 171 - -
Mal4g3731 610 CDD REC_typeB_ARR-like 38 152 - -
Mal4g3731 610 Gene3D - 210 273 - -
Mal4g3731 610 PANTHER TWO-COMPONENT RESPONSE REGULATOR 432 570 IPR045279 GO:0009736
Mal4g3731 610 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 431 IPR045279 GO:0009736
Mal4g3731 610 Pfam Myb-like DNA-binding domain 216 266 IPR001005 -
Mal4g3731 610 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 211 270 IPR017930 -
Mal4g3731 610 SMART REC_2 36 148 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3731 Mal-Chr4 109784798 109788014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3731 70 605 Response Regulator Gene Family AT3G16857 45.669 3.40e-150 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal4g3731 Response_reg 5.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3731 - K14491 mtr:MTR_2g034960 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3731 4 109784798 109788014 Mal4g3731 4 109784798 109788014 ECH
Mal5g4881 5 122041997 122045534 Mal4g3731 4 109784798 109788014 PCT