Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3703 ATGGAAGCTATCTCCTATACTCTATCATCATTTTCTGATTCAAATCCTCTCATTTTTCCCACAAAAAATTACCATTTTACTCTCAACAATACACCACCATCTACCCCAACCTCAATAGCATCGTTCATTAGGCACCAACATCACACACCCATCAACGTACATTACTCAAAAAATGTAACCACAAACGTTTCTTCTTTGAATCCATGCTCATTTGTAGAGTCGTACCTCATCAACAACCTTGATTTTTCACCCGATTCCGCTCTAAAAACTTTCAAAAAAGCCCGTTTCAAAACTCCGAATAAGCCCGATTCAGTTGTAGAATTATTCAAAAAATGGGGTTACTCAAACCCCAACTTGCACAACATCTTTACAAAGGAACCATGGTTACTTTCTTGCAACCCAAGCAAAAGGATTCTCCCAAAGTTTCAATTTTTACTCTCCAAAGGTTGTTCTACTTCCGACATTATCTACATTGTGACCAAGGCACCAACGTTTCTTAGTCGAAGCCTAGAGAATCACACTGTTCCAACATATGAATTGTTAATTAGTTACTTGAAATCCGATCAAGAAACACTGGCTTGCATAATTCGAAATCCACTTTCATTTTGTTGTACTAGGATGAGAACTAATGTTAAATTGTTGGTTGATTTTGGTGTTTCGGATTCAAACATTGTCACATTGCTTCGAAAATGGCCTAGTGTATTTTCCTCAAATCAATTGTTAAGGGAAGTTGAAGAATTAAAGGAATTGGGTTTTAACCCTTTAAAGTCAGCTTTTAGTATAGCATTGCTTGCTAAACTAACTGTGAGAAAATCAAATTGGCATGATAAAGTTGATGCCTTTAAGAAATGGGGTTGGTGTGATGAAAATGTCGTTGAAGCATTTAGGAGACAACCTAATTGTATGTTGGCATCATGTGATAAAATTAATAATGTGATGGAGTTTTGGGTCAATGAGTTGGATTGGGGTGCTAAAGAACTTGTCAAAGGGACAAATATTTTTGGACTTAGTTTGGAAAAGAGGGTCATTCCAAGAGGTTTTGTTGTTCAATATTTGTTAGCAAAAGGTTTGATGGACAAGAATGCTAGCTTGATTACACCTTTTTTGATTTCTGAAGAGATGTTTTTGCAGAAGTTTGTGAATTGTTTTAAGGAGAATGATGCATCTCATATGTTGAAGTTATATAATGAAAAAATGAACCTTCAAGATTGCAAAAGAGGGTATAGCATGCAACAATTATCAAATGGTTAA 1251 0.3557 MEAISYTLSSFSDSNPLIFPTKNYHFTLNNTPPSTPTSIASFIRHQHHTPINVHYSKNVTTNVSSLNPCSFVESYLINNLDFSPDSALKTFKKARFKTPNKPDSVVELFKKWGYSNPNLHNIFTKEPWLLSCNPSKRILPKFQFLLSKGCSTSDIIYIVTKAPTFLSRSLENHTVPTYELLISYLKSDQETLACIIRNPLSFCCTRMRTNVKLLVDFGVSDSNIVTLLRKWPSVFSSNQLLREVEELKELGFNPLKSAFSIALLAKLTVRKSNWHDKVDAFKKWGWCDENVVEAFRRQPNCMLASCDKINNVMEFWVNELDWGAKELVKGTNIFGLSLEKRVIPRGFVVQYLLAKGLMDKNASLITPFLISEEMFLQKFVNCFKENDASHMLKLYNEKMNLQDCKRGYSMQQLSNG* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3703 416 PANTHER CGI-12 PROTEIN-RELATED 46 404 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 Pfam mTERF 207 375 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 Pfam mTERF 107 253 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 Gene3D Transcription termination factor 3, mitochondrial 172 387 IPR038538 -
Mal4g3703 416 SMART mt_12 324 358 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 SMART mt_12 192 220 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 SMART mt_12 225 253 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 SMART mt_12 156 188 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 SMART mt_12 120 151 IPR003690 GO:0003690|GO:0006355
Mal4g3703 416 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 46 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3703 Mal-Chr4 109047320 109048570 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3703 mTERF 6.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3703 K15032 - gmx:102663414 347.051