Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3691 ATGTGTGGAGGTGCTATCATTTCTGATTTCATTGGTGTCAAGCGTGACCGTGACCTATGGTTTGAGCTTGATCCTTCTGTTGATCTACTTGGTCTTGGTGGTGGTGCTGCTGCTTTTAACACCCCCACTTCTAAAGAGCTACCACCCCTTAGCTTTGAGCAATTCTTCTCATATGACAAAAAAGTGGTAGCATGTGACAATGTTGAGAAGAAAGAAAGCTTGGAAACTGTAGAGAAGGGTAAGAAGAGCACTGGAGGAAAAAGAGCTCGCAAGAATGTCTACAGAGGAATCAGGCAGAGGCCATGGGGCAAGTGGGCTGCAGAAATAAGGGACCCACAACAAGGTGTTCGTGTTTGGCTTGGCACTTTCTCAACAGCTGAAGAAGCAGCTAGGGCCTATGATGCCGCCGCCAAGCGCATCCGCGGCGACAAGGCAAAGCTCAATTTCCCCGACACTCCTGTCGTTGCTGCTCCGGATGCTGCTGCCCCTGTCACCGCTCCTCCAGCAAAGAAGCGGTGTGTCAGCCCTGATCAAGCCAGCTCCCAGGCTAGCTCTGAGTCAGCTTGGTCTGGGTTTGGGCTTGATGAGGAAATGGAAATCAAACAGAAAATGTCTGACCTTGAATGGATCCTTGGATTGGATAGTGACATTCCTCAGGCCCAAGCCCCGGCCCAAGTTGAGGTTCAGTCTGTGCCGGAGCCCGAGCCTTTCACCTTGCCTGCTGATTGGGACAACAGCTTCATGGACTTTTGGACTTGTGAAGACATGGTTGACCCCATCCGTCACCTGCTTTACTAG 798 0.5113 MCGGAIISDFIGVKRDRDLWFELDPSVDLLGLGGGAAAFNTPTSKELPPLSFEQFFSYDKKVVACDNVEKKESLETVEKGKKSTGGKRARKNVYRGIRQRPWGKWAAEIRDPQQGVRVWLGTFSTAEEAARAYDAAAKRIRGDKAKLNFPDTPVVAAPDAAAPVTAPPAKKRCVSPDQASSQASSESAWSGFGLDEEMEIKQKMSDLEWILGLDSDIPQAQAPAQVEVQSVPEPEPFTLPADWDNSFMDFWTCEDMVDPIRHLLY* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3691 265 PANTHER DNA-BINDING DOMAIN 1 176 IPR044808 GO:0003700|GO:0009873
Mal4g3691 265 MobiDBLite consensus disorder prediction 175 189 - -
Mal4g3691 265 SMART rav1_2 93 156 IPR001471 GO:0003700|GO:0006355
Mal4g3691 265 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Mal4g3691 265 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Mal4g3691 265 CDD AP2 94 152 IPR001471 GO:0003700|GO:0006355
Mal4g3691 265 MobiDBLite consensus disorder prediction 166 190 - -
Mal4g3691 265 PANTHER EREBP TRANSCRIPTION FACTOR 1 176 - -
Mal4g3691 265 SUPERFAMILY DNA-binding domain 93 151 IPR016177 GO:0003677
Mal4g3691 265 Pfam AP2 domain 93 142 IPR001471 GO:0003700|GO:0006355
Mal4g3691 265 Gene3D AP2/ERF domain 93 151 IPR036955 GO:0003700|GO:0006355
Mal4g3691 265 ProSiteProfiles AP2/ERF domain profile. 93 150 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3691 Mal-Chr4 108785997 108787784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3691 1 257 AP2-EREBP Transcription Factor Family AT3G16770 40.767 2.49e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal4g3691 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3691 K09286 - gmx:100817253 206.838