Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3674 ATGCAAATTTGCAATGAAGTTTTGGATTATGCTGTTGATGGAATTAACAAATCTGTTGGTACATTGGATAAATTTGATTTCAATAAGTTAAGTGAATATGCTTATGATCTCAAAGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTGGATGGTTTTGAGAATTCAAAAACAAAAGCTGGTGAAACAATGGCTAAGACTTTGAACACTTCTATGCAATTAAGTAGTAATGCTATTGACATGATTAATGCTGTTTCTGGCTTACTTAATGGTCTTGATCAAATCCCAAATAGTGTTGGTAGGAGACTTTTATCCGATGATGGTTTTCCTTCATGGGTTAGTGAAGGGCAACGACGTCTTCTCGCTGCTGGAAATGTTAAGGCAAATGCTGTTGTAGCTCAAGATGGAAGTGGACAGTTTAAGACATTAACTGATGCTCTTAAGACTGTTCCTCCCAAAAATGCACAACCTTTTGTGATCCATGTTAAGGCTGGTGTTTATAAAGAGACTGTTAATGTGGCTAAGGAAATGAATTTTGTTACCATCATTGGTGATGGTCCTACAAAGACCAAATTCACTGGTAGCCTCAACTTTGCTGATGGTGTCAACACTTACAATACTGCAACGTTCGGTGTTAATGGTGCAAACTTCATGGCAAAGGATGTCGGCTTCGAGAACGCAGCAGGAGCAAACAAACATCAAGCAGTTGCCCTCCGAGTAACAGCAGACCAAGCAATCTTCTACAACTGTCAAATGGACGCTTTCCAAGACACACTCTTCGTCCAATCCCAACGTCAATTCTACCGTGACTGCAGCATCTCTGGCACAATCGACTTTGTTTTTGGTGACGCCTTCGGAGTTTTCCAAAATTGCAAACTAATTGTAAGAAAACCAGCAGATGGCCAACAATGTCTAGTAACTGCAGGTGGAAGAATCAAAGCCGATAGCGCAAGTGCTCTCGTTTTCCTAAGTTGTCAATTCACAGGTGAACCAGCAGTAAAAACTATAAAACCCCTATTATCTTACCTAGGAAGACCATGGAAGGCATATTCAAAAGTTGTGATAATGGACTCAATGATTGATGACATTTTTGTCCCTGAAGGTTACATGCCATGGATGGGAAGTGCTTTTACACAAACAAGTACTTACTATGAATACAATAATAAAGGTCTTGGTGCTAACACATCAAAAAGAGTTAAATGGCCTGGTGTTAAGACTATATCTCCTAATGAAGCAGCTAAATATTACCCTGGTAAATTCTTTGAGATTGTTAATGCAACTGAACGTGATGCTTGGATTGTTAAGTCTGGCGTTCCTTATGCACTTGGACCTATGTAA 1344 0.3921 MQICNEVLDYAVDGINKSVGTLDKFDFNKLSEYAYDLKVWLTGTLSHQQTCLDGFENSKTKAGETMAKTLNTSMQLSSNAIDMINAVSGLLNGLDQIPNSVGRRLLSDDGFPSWVSEGQRRLLAAGNVKANAVVAQDGSGQFKTLTDALKTVPPKNAQPFVIHVKAGVYKETVNVAKEMNFVTIIGDGPTKTKFTGSLNFADGVNTYNTATFGVNGANFMAKDVGFENAAGANKHQAVALRVTADQAIFYNCQMDAFQDTLFVQSQRQFYRDCSISGTIDFVFGDAFGVFQNCKLIVRKPADGQQCLVTAGGRIKADSASALVFLSCQFTGEPAVKTIKPLLSYLGRPWKAYSKVVIMDSMIDDIFVPEGYMPWMGSAFTQTSTYYEYNNKGLGANTSKRVKWPGVKTISPNEAAKYYPGKFFEIVNATERDAWIVKSGVPYALGPM* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3674 447 Pfam Pectinesterase 131 423 IPR000070 GO:0030599|GO:0042545
Mal4g3674 447 Pfam Plant invertase/pectin methylesterase inhibitor 2 83 IPR006501 GO:0004857
Mal4g3674 447 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 87 IPR035513 -
Mal4g3674 447 ProSitePatterns Pectinesterase signature 1. 156 175 IPR018040 -
Mal4g3674 447 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 87 IPR035513 -
Mal4g3674 447 CDD PMEI-like_3 1 89 - -
Mal4g3674 447 PANTHER PECTINESTERASE 1 446 - -
Mal4g3674 447 SUPERFAMILY Pectin lyase-like 128 423 IPR011050 -
Mal4g3674 447 PANTHER PECTINESTERASE 1 446 - -
Mal4g3674 447 ProSitePatterns Pectinesterase signature 2. 275 284 IPR033131 -
Mal4g3674 447 Gene3D - 128 446 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3674 Mal-Chr4 108437973 108439600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3674 1 442 Carbohydrate Esterase AT5G49180 48.337 5.91e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3674 K01051 - gmx:100784682 677.937