Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3668 ATGGAAGTTAAAAACGATGAACCCATACCCAAATTCACCAAAGATCATCAAAACCCCAACATCCCCAACGATTTCGATGCAAAAGGCTACAGTCTCAACGGAAAAATCATGCTCTGCGCAATCATCCTTCTCTTCTTCATCATCGTTTTAATGCTTTGTCTCCATATCTACGCTCGTTGGTACCTTCTCCAATCTCGCCGCCGTCGCAACCGTCTTCGCCGTCGTACTCAGCTGGTTTTCTTCTCCGACAATCCAACAACAACCACCGCTTCCGCCGTTGTTGCTTCTCGTGGACTCGACGCTTCTGTTATCGCTAAACTTCCTTTGTTCTTTTACGATCCGAAGACGCAACTGGAAAACGTACCGGAATGTGCGGTTTGTTTGTCGGAATTTGAATCCGGTGAAACGGGTCGGGTTTTACCGAAATGTAAGCATAGTTTTCATACTGAGTGTATTGATATGTGGTTTCATTCTCATGACACGTGTCCACTTTGTCGGGCACCCGTGGAGGCCATGTTTACCCGACCCGAAGTTGTTATAACGGTTTGTGAACCGGAGACCGGTTCAAGTTCCGGTTTGATTGAAGATGAGAGTGGGAGTCGAACCGGTGAAGAGGTTGGTTCGAGTTCGGTTGGGTTAAGGAGAAAGCCGTCTTTTACGGGAGTGACAGTTGAGGTGCCTACAAGAAATGAAGATTTTCGGGATGAGTCGCCGTCGTCGACTCAATCATCGTTTCGGTCAATGTTGTCGTTTAAGAGGATTCTTAGTATGGATTGGAAAGGGAGTGTTTCTCCGTCGTCGTGTGGTGGTAATAGCTCAGCAATCGAAGTCTTAAGTTCGAATCCGGATAAAAATAGTCGGTCTAATAATATCAACATTGAAAGTTAA 888 0.4595 MEVKNDEPIPKFTKDHQNPNIPNDFDAKGYSLNGKIMLCAIILLFFIIVLMLCLHIYARWYLLQSRRRRNRLRRRTQLVFFSDNPTTTTASAVVASRGLDASVIAKLPLFFYDPKTQLENVPECAVCLSEFESGETGRVLPKCKHSFHTECIDMWFHSHDTCPLCRAPVEAMFTRPEVVITVCEPETGSSSGLIEDESGSRTGEEVGSSSVGLRRKPSFTGVTVEVPTRNEDFRDESPSSTQSSFRSMLSFKRILSMDWKGSVSPSSCGGNSSAIEVLSSNPDKNSRSNNINIES* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3668 295 CDD RING-H2_EL5_like 123 166 - -
Mal4g3668 295 MobiDBLite consensus disorder prediction 188 207 - -
Mal4g3668 295 MobiDBLite consensus disorder prediction 1 20 - -
Mal4g3668 295 SUPERFAMILY RING/U-box 103 172 - -
Mal4g3668 295 MobiDBLite consensus disorder prediction 260 295 - -
Mal4g3668 295 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 27 217 - -
Mal4g3668 295 SMART ring_2 124 165 IPR001841 -
Mal4g3668 295 MobiDBLite consensus disorder prediction 188 214 - -
Mal4g3668 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 174 IPR013083 -
Mal4g3668 295 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
Mal4g3668 295 Pfam Ring finger domain 123 166 IPR001841 -
Mal4g3668 295 PANTHER RING-H2 FINGER PROTEIN ATL64 27 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3668 Mal-Chr4 108385185 108386072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3668 1 265 Rapid Response to Elicitors AT3G16720 46.918 4.77e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3668 - - lja:Lj6g3v1468220.1 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4856 5 121779028 121779861 Mal4g3668 4 108385185 108386072 PCT