Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3604 ATGGAAGTGAAAGGAAGTATAATTAGTGACTCAAATATCACCATGCTCCAAAGTGAGGATGAGTTAGATCTTCGAAGAGGTCCATGGACCGTTGATGAAGATCTTGCTCTCATCAATTACATTGCTAATCATGGTGAAGGTCGATGGAATACTCTTGCTCGTTCAGCTGGACTCAAACGAACTGGCAAGAGCTGTAGATTAAGATGGTTGAATTATCTTCGTCCAGATGTTCGACGTGGTAACATCACACTTGAAGAACAACTTCTTATTCTCGAGCTTCATAGTCGTTGGGGAAACCGATGGTCGAAAATTGCTCAATACTTGCCAGGAAGAACAGACAACGAGATCAAGAATTATTGGAGAACTCGTGTCCAAAAACATGCCAAACAACTCAAATGTGACGTGAATAGCAAACAATTCAAAGATGCTATGCGCTACCTTTGGATGCCAAGGCTAGTGGAGCGCATCCAAGCTGCCGCATCCACCTCCACCACCACAGCTTCACCAAGTGTTACAACAACGGTCACCACCAACAATACGACATACAACTTAAACAACAATTTTGATGTTCATAGTAGCGCGAACATGATGTTAACTCCAACAATTACGAACAACACTTTATGTGGTTCGCATGTTACACAAAGTTATACTCCGGAGAATAGTGGTAATGGCGCCGCGGCTGTATCATCGGATTCATTTGGGACATCACAAGTTTCGCCTATCTCGGAATTGACTCAAGATTATTACAATGTCCCGGTTGGTAGCAACATCAATAATAACCCTAATTTTGATTACTACCAACAAGCTCAACAATTTGGTTTTTCAGATTGCATCACTAGCCCATCTGGGTTATTCCCACAAATGGATTTCAATTCTATGGAACAAAACACGACTTGGATTCAAGGGGACACACCCGACAATTTCTGGAATGTTGAAAACATGTTGCTCTTTCAACAACTCAATGACAACATGTGA 975 0.4174 MEVKGSIISDSNITMLQSEDELDLRRGPWTVDEDLALINYIANHGEGRWNTLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAASTSTTTASPSVTTTVTTNNTTYNLNNNFDVHSSANMMLTPTITNNTLCGSHVTQSYTPENSGNGAAAVSSDSFGTSQVSPISELTQDYYNVPVGSNINNNPNFDYYQQAQQFGFSDCITSPSGLFPQMDFNSMEQNTTWIQGDTPDNFWNVENMLLFQQLNDNM* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3604 324 Gene3D - 83 146 - -
Mal4g3604 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 73 IPR017930 -
Mal4g3604 324 CDD SANT 28 73 IPR001005 -
Mal4g3604 324 Gene3D - 23 79 - -
Mal4g3604 324 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Mal4g3604 324 SUPERFAMILY Homeodomain-like 23 120 IPR009057 -
Mal4g3604 324 SMART sant 25 75 IPR001005 -
Mal4g3604 324 SMART sant 78 126 IPR001005 -
Mal4g3604 324 CDD SANT 99 122 IPR001005 -
Mal4g3604 324 PANTHER MYB TRANSCRIPTION FACTOR 3 321 - -
Mal4g3604 324 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Mal4g3604 324 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Mal4g3604 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Mal4g3604 324 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 321 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mal4g3604 324 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3604 Mal-Chr4 106508656 106510439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3604 22 166 MYB Transcription Factor Family AT1G48000 77.241 8.57e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal4g3604 Myb_DNA-binding 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3604 K09422 - gmx:100805341 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3604 4 106508656 106510439 Mal4g3604 4 106508656 106510439 ECH